Gossypium arboreum (tree cotton): 108476142
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Entry
108476142 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108476142
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108476142
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108476142
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108476142
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108476142
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108476142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
UPF1_Zn_bind
SpeFL
CpXC
Motif
Other DBs
NCBI-GeneID:
108476142
NCBI-ProteinID:
XP_017633743
UniProt:
A0A0B0PGH8
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All DBs
Position
5:34827415..34834420
Genome browser
AA seq
1005 aa
AA seq
DB search
MGKRVKKNRRVPPKDKKVVAAQSPKAIPQEKPASIDDVDDEIKAVKERKKCLHFDKGINI
DKLLTKLRSSDPIRCEDCREGRNDRRGGKGKSKHGKKKGSASVESKRESKAIWVCLECGH
YVCAGVGLPTASTSHAVRHLRQTRHHLVVQWDNPQLRWCFSCSIFIPVEKMEENSESKDV
LYEVVKLIKERSSESSTNAVEDVLSGSGSVACDIKSEGTISNSLDGKNGYVVRGLVNLGN
TCFFNSVMQNLLALNRLRDYFSNLDVSMGQLTISMKKLFAEIRPEMGLRNAINPKPFFAS
LCSKAPQFRGYQQHDSHELLRCLLDGLYTEELALKKHINASKSDAVTASQDLTFVDAVFG
GQISSTLCCEECGHSSTVYEPFLDLSLSVPTKKTPSKKAQPVSRARKTKLPMKKVGRNRG
KVNKDVDQVPAQVVTAPVPNSESSGPSHIAVPQTEPKVASSGDSSLSHAAGPSTKADESS
SASRNLFDVVESQKEQVVESTVKENSAGTDDFAWLDYLTTENTLPENDAGADDFSWMDYL
QQEIVADESDLISQNNNTSLQDSEEKELVPNAALAESCEVSVLEGETNKKTEDSSGNLQE
ELPLLVQDSVVLLLPYKEDIPGTESVRENEASSSNAGLGQEEVEFDGFGDMFNEPEIAEG
PIIGPSLANEVAETGFMAGSISDSDPDEVDDSNSPVSVESCLSHFIKPELLSDDNAWNCE
NCAKILRHQKLKAKKKQTKMGKDLLNGSETRSLDMEHQCPNGVRTISNGDISSSGDSSVF
HNKNQNGVKVENGQTSELDSVELEDASPLKLNSSVSSKCYAQEKCGGTLTIDSCNVENHS
GNDTFHQSNSHMTENCQSGLSDDEELDSEHVKVKRNATKRVLINKAPPVLTIHLKRFCQD
ARGRLSKLNGHVNFRETIDLRPYLDPRGEDADNCNYSLVGVVEHSGTMRGGHYIAYVRGG
EKRKGTIDIDHVGSQWYYVSDQHVRQASIEEVLRCEAYILFYEKV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagagttaaaaagaatcgtcgagtacctccgaaggacaaaaaggttgtggca
gctcaatctccaaaagctatacctcaggagaaacctgccagtattgatgatgttgacgat
gaaattaaagccgtaaaagagaggaaaaagtgcctgcattttgataaaggcatcaacata
gataagttgttgactaaacttaggtcatcagatcccataaggtgtgaagattgtagggaa
ggcagaaatgataggagaggaggtaagggaaagagtaaacatgggaagaagaagggaagt
gcttcggttgagtcgaaacgtgaatcgaaagccatttgggtttgtttggagtgtggacat
tatgtatgcgctggagttggtttgccaacagcttctacctcacatgctgttcgacatctt
agacaaacccgtcaccacttggtggttcaatgggataatcctcaattgaggtggtgcttc
tcttgcagcatattcattccagttgagaaaatggaagagaacagtgaaagcaaagatgtt
ttatatgaggttgtaaaattgattaaggaacgatcatctgaatcatccacaaatgctgtt
gaggatgttttgtcaggaagcggcagtgttgcttgtgatatcaaatcagaaggaactata
tcgaattctttggatggaaaaaatggttatgtggttcgaggtttggttaatctcggtaat
acgtgcttctttaattcagtaatgcagaatcttctggctctgaataggctaagggactac
ttctcgaatctggatgtgtccatggggcagttaacaatttctatgaaaaagctttttgct
gaaataagacctgagatgggcttgagaaatgctatcaatccaaagccattttttgcatcc
ctttgttctaaggctccccagtttagaggctatcagcaacatgacagtcatgaattgctt
cgttgcttacttgatgggctttatacagaggagttggctctaaaaaaacacattaatgct
tctaaaagtgatgcagttactgcaagtcaggatcttacttttgtggatgctgtatttggg
ggtcaaatttcgagtactctctgttgtgaggagtgtgggcactcgtcaacagtgtatgaa
ccatttctagatctctcactttcagtgccaactaagaaaaccccttctaaaaaggctcaa
ccagtctctcgagcaaggaaaacaaagctgccaatgaaaaaagttggcaggaatagagga
aaagttaacaaagatgtagatcaggtgccagctcaagttgttacggctcctgtacctaac
agtgaatcttcaggcccaagccatatagctgtgccccaaacggaacccaaggtggcatca
tctggtgattcttcactctcacatgctgctggcccaagcaccaaggcagatgaaagcagt
tctgcttcaaggaatctctttgatgttgtggagtctcagaaagaacaagttgtggagagt
acagtgaaggaaaattcagctgggacagatgattttgcttggttggattacctcacaaca
gagaatacactcccggaaaatgacgctggtgcagatgatttttcttggatggattatctg
caacaggaaatagtagctgatgagagtgacttgatttctcaaaataacaatacttccctt
caagattcggaggaaaaggaactagttccaaatgcagctttagcagaaagttgtgaggtt
tctgtacttgagggggaaaccaataaaaaaacagaagattcttctgggaaccttcaagag
gagcttccattgctggttcaagattctgtggttcttttgcttccatataaagaggatatt
ccaggtactgagagtgtgagagaaaatgaggcctcttcatcaaatgcgggtcttggacaa
gaggaagtggagtttgatggctttggtgacatgtttaatgagcctgaaattgctgaaggg
cccatcattggaccatctttggcaaatgaagttgctgaaactggttttatggctgggagt
attagtgattctgatcctgatgaggttgatgacagtaattctccagtatccgtggaaagt
tgtttgtctcacttcataaagccggagcttctttcggatgataatgcttggaattgtgag
aattgtgcgaaaattttgcgacatcagaagttgaaagcaaagaagaagcagactaaaatg
ggaaaggatttactcaatggaagtgagacccgaagtttagatatggaacaccaatgccct
aatggagttagaaccattagtaatggcgatatcagtagttccggtgatagctcggttttt
cataacaagaatcaaaatggtgtaaaagttgaaaatggtcaaacaagcgagctagattct
gttgaattagaagatgcaagtccgttgaaattaaattcttcagtttcctctaaatgttat
gctcaagaaaaatgtgggggtaccctaactattgattcttgcaatgttgaaaatcatagt
ggtaatgatacctttcatcagagtaattcacatatgactgaaaactgtcaatcgggctta
agtgatgatgaagagttagactccgaacatgtgaaggttaagagaaatgctacaaagagg
gtcctcataaacaaggcaccgcctgttctgactattcatttgaagaggttttgtcaagat
gcccgtggtcgtttgagtaaattgaatggtcatgtcaatttcagagagacaattgatctt
agaccatatctggatcccaggggtgaagatgcagataattgcaattacagtctggtgggg
gttgtggagcattcgggaacaatgagaggtggtcactacattgcgtatgtgagaggaggt
gagaaaaggaaagggacgatcgatatcgaccatgttggatctcaatggtattatgtgagt
gatcaacatgttcgccaagcatcaatcgaagaagttcttcgctgcgaggcatacatttta
ttctacgaaaaagtttga
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