Gossypium arboreum (tree cotton): 108478281
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Entry
108478281 CDS
T05776
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108478281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108478281
04147 Exosome [BR:
gab04147
]
108478281
04090 CD molecules [BR:
gab04090
]
108478281
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108478281
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108478281
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108478281
CD molecules [BR:
gab04090
]
Proteins
108478281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_15
Zeta_toxin
SbcC_Walker_B
AAA_24
DUF815
AAA_30
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
108478281
NCBI-ProteinID:
XP_017636209
UniProt:
A0A0B0NGE0
LinkDB
All DBs
Position
6:52053793..52059755
Genome browser
AA seq
1276 aa
AA seq
DB search
MATENGFNGDTNLHKASTSKSQETSKGDEKTNTVPFHKLFVFADSTDILLMIVGTVGAVG
NGLCMPLMTILFGDLVNAFGQNQSNNQVVHVVSKVSLKFVYLAVGAGVAAFLQVSCWMVT
GERQAARIRGLYLKTILRQDIAFFDVETNTGEVVGRMSGDTVLIQDAMGEKVGKVLQLLS
TFFGGFTIAFVKGWLLTLVMLSSIPLLVLSGATMAVIISKMATRGQTAYAKAATVVEQTI
GSIRTVASFTGEKQAISNYNKFLVTAYKSGVHEGTAAGLGLGVVLLIIFCSYSLAVWFGG
KMILEKGYTGGVVVNVIIAVLTGSMSLGQASPCMSAFAAGQAAAFKMFKTINRKPEIDPY
DMSGKVLEDIHGDVELRDVYFSYPARPEEQIFSGFSLSIPCGTTAALVGESGSGKSTVIS
LIERFYDPQAGEVLIDGINLKDFQLRWIRGKIGLVSQEPVLFTSSIKDNIAYGKEDATIE
EIQAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEAT
SALDAESERVVQEALDRIMGNRTTVIVAHRLSTVRNADTIAVIHRGKMVEKGSHSELLKD
PEGAYSQLIRLQEVNKESEQVADLSEVTPESFRQSSLRRSMKRSISRGSSIGNSSRHSFS
VSFGLPTGMNVNDSATVDTEDPSKQPLKQPLEVPIRRLAYLNKPEIPVLLLGTIAAVANG
VILPIYGLLLSHVIETFFKPPDELKKDTRFWALIFMALGLASLLASPARTYFFSIAGCKL
IQKIRLMCFSKVVHMEVGWFDEPDNSSGSIGARLSVDAASIRGLVGDALAQMVSNLASAI
AGLVIAFVASWQLALIMLGLVPLIGFTGYFQANFIKGFSADAKMMYEDASQVANDAVGSI
RTVASFCAEEKMMQLYSKKCEGPLQTGIKQGLISGSGFGLSFFLMFAVYATNFYAGAQLV
KHGHVTFSDVFQVFFGLTMATIGITQSSSFAPDSSKAKSAAASIFAIIDRESKIDPSDES
GTTLENVKGDIELHHVSFKYPLRPDIQIFRDLSLSIHAGKTIALVGESGSGKSTVISLLQ
RFYDPDSGHITLDGVEIQNLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGGNATEAEI
LAASELANALKFISSLQQGYDTVVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSA
LDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKD
GIYASLVALHMSASAS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggctactgagaatggctttaatggtgataccaacctgcacaaggccagcacatcaaaa
agccaggaaaccagcaaaggagatgagaaaaccaacactgttccgtttcacaaattgttt
gtgttcgcagattcaaccgatatcttgttaatgatcgttggtacagtcggtgcggtcggg
aacggtttatgtatgccccttatgacaatcttattcggagatcttgttaacgcttttgga
caaaaccagagtaataaccaagtggttcatgtggtctcaaaggtttctttgaaatttgtc
tacctcgcggttggggccggggtggcggcatttctccaggtgagttgctggatggtcaca
ggtgagagacaagctgctcgaataaggggcttgtacttgaaaaccatattgagacaagat
attgctttctttgatgttgaaacaaacacgggagaggtcgttggacgtatgtctggtgac
acagttctcatacaagatgccatgggagaaaaggttgggaaggttttacaattgctgtcc
acattctttggaggtttcactatagcatttgtcaagggatggcttctaactcttgtgatg
ttgtcatctatccctctccttgtattatctggtgcaacgatggctgtcattatatctaag
atggcaactcgtggacaaactgcttatgctaaagctgccaccgttgttgaacagacaatt
ggttcaattagaactgttgcatcatttactggtgagaagcaagccataagcaattacaac
aaatttcttgttacggcttataaatcaggtgttcatgagggaactgctgctggactcggt
ctcggtgtagtcttgttgatcatattctgcagttattctttggctgtatggtttggtggg
aagatgattttggagaaagggtacactggtggtgtagtagttaatgtgattatcgctgta
ttgaccggttcaatgtccctggggcaggcatcaccatgcatgagtgcatttgctgctggt
caagctgcggcatttaagatgttcaagaccatcaataggaagcctgagatcgacccatac
gatatgagtgggaaagtgttggaggacattcacggggatgtggaattgagagatgtttat
ttcagttatccagccaggccagaagagcaaattttcagtggattctctctttctattcca
tgtggtacaacagctgctttagttggagaaagtggaagtgggaaatcaactgtaattagt
cttatagaaaggttttatgatccacaagccggtgaagtgcttatcgatggcattaacctc
aaagatttccaacttagatggatcaggggaaagattggccttgttagccaagaacctgtg
ttgtttacatcaagcattaaggataatattgcatatggaaaagaagatgcaaccatagaa
gagatacaagccgcggctgaacttgcaaatgctgctaagttcatcgataaactacctcag
gggctagataccatggttggagagcatgggactcagctttctggtggacagaagcagaga
gttgcaatagcaagagcaattctaaaggaccctcggattttgcttttagacgaagctaca
agtgcattagatgcagaatctgaaagagtggtacaagaggcattggaccgcataatgggc
aataggactacggtcatcgttgctcatcgtttgagtaccgtgagaaatgcagatacaatt
gccgtaattcatcgaggaaagatggttgaaaaagggtcacattcagaactactcaaggat
cccgagggagcgtactctcagcttattcgattacaagaagtaaataaagagtcagaacag
gtagcagatttatcagaagttaccccagaatcatttagacagtcaagcctgagaagatca
atgaagcgatcaatcagtaggggatcatctataggaaatagcagccgccattctttctct
gtatccttcggtttgcctactggaatgaatgtcaatgattctgcaacagtagataccgaa
gacccttccaaacagccattaaagcagcctctagaggttcctatccgtcggctagcttac
ctcaacaagccagagattcctgttctcctacttggaactatagcagctgttgccaatggt
gtcatactgccaatttatggtctgctgctttcccatgtaatcgaaacattctttaaacca
cctgatgagttgaaaaaggatacgagattctgggcactgatatttatggcccttggcctg
gcatcattattggcatctccagcacgaacatactttttctccattgctggatgtaaacta
atccaaaaaatcagattaatgtgtttttcgaaggtggttcacatggaagttggttggttt
gatgaaccagataattccagtggttctatcggtgcaaggctctcggttgatgcagcctca
atacgtggtctagttggagatgcactagctcagatggtatcaaaccttgcatcggccatt
gctggtttggtcattgcttttgttgcaagttggcaattggcacttataatgctaggtcta
gtccctttgataggattcactggatattttcaagcaaatttcattaagggatttagtgca
gatgcaaagatgatgtatgaagacgcaagccaagttgctaatgatgctgtcgggagtata
agaacagtagcttcattttgtgcagaggaaaaaatgatgcaactctatagcaagaaatgc
gagggtccattgcaaacagggattaagcaagggttgattagtggatcaggatttggactg
tcattctttttgatgtttgctgtttatgctaccaatttctatgccggagctcagcttgtc
aagcacggtcacgtaacattctcagatgtttttcaagttttctttggtttgacaatggcg
actattggaattactcaatcaagctcctttgctcctgattccagcaaagccaagtcggct
gctgcttccatatttgcaattatagaccgcgagtctaagatagacccgagcgatgagtcc
gggacaacactagaaaacgtgaagggagatatcgagcttcatcatgttagtttcaagtat
ccattaaggccagacattcaaattttccgagacttgagtttgtctatccatgctggcaag
actattgctttggttggagaaagtgggagtgggaaatccacagtgatttcattattgcag
agattttacgatcctgattcgggacatatcactcttgatggagttgaaatccaaaacctc
caattaaagtggttgaggcaacaaatggggcttgttagccaagaacctgttttgtttaac
gaaacaatccgtgccaacattgcatacggaaagggaggaaatgcaaccgaggcagaaatc
ttagctgcatcagagttggccaatgctctcaagttcataagctcattacaacagggttac
gatacggtagtaggagagcgaggtgttcaattatcaggaggacaaaagcaaagggtagcc
attgcacgagccatagttaaaagtccgaagatacttctcctagacgaggcaacaagtgcg
ttggatgccgaatcagagagggtggttcaggatgcattagatagagtcatggtgaaccgc
acaacggtggtggttgctcatcggctgtcgacaataaaaaatgcagatgtgattgcagtg
gttaaaaatggtgtcattgtagagaaaggaaaacatgacaccttgataaatatcaaagat
ggtatttatgcttctttggttgcacttcacatgagtgcttccgcttcataa
DBGET
integrated database retrieval system
