Gossypium arboreum (tree cotton): 108478834
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Entry
108478834 CDS
T05776
Name
(RefSeq) DNA-3-methyladenine glycosylase-like isoform X1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108478834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108478834
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
108478834
DNA repair and recombination proteins [BR:
gab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108478834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
108478834
NCBI-ProteinID:
XP_017636779
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All DBs
Position
6:complement(69172580..69174458)
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AA seq
318 aa
AA seq
DB search
MLFSNMSKTNMVRRHVLEKKRSCSKEKESGCLSKHLKKIYPIGLQRTSSSLSLSSLSLSL
SQNSNDSSLTDHSSTPLEQKISLALSLIAPHRERREFPMVVKTHVHHHQQQQQDPPGNGE
VRRCHWVTKNSDKVYISFHDEQWGVPVYDDNKLFELLALSGMLMDYNWTEILKRKDLYRE
SFLGFDPEIVAKMGDKEIHEISSNKAMMLAESRVRCIVDNAKCILKIVRQYGSFSSFMWG
YVNYKPTINKYKYPRNVPLRTPKAEAISKDLVKHGFRFVGPVIVYSFMQAAGLTIDHLVD
CFRYSECVSLAERPWRHI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttcaaacatgtctaaaacaaatatggtaaggagacatgtattagagaagaag
agatcatgttccaaagagaaagaaagtggctgtttatctaaacatctgaagaaaatctac
ccgattgggcttcaaagaacctcttcatctttatcgttatcatccttgtccttgtctttg
tcacaaaactccaatgattcatctcttacagaccattccagcactcccttggaacaaaag
atttcattggcacttagcttgattgctcctcaccgtgagcgaagagagttccccatggtt
gtcaaaactcatgtccatcatcaccagcagcagcagcaggatcctcctggcaatggtgaa
gtgaggaggtgccattgggttacaaagaacagtgataaggtttacatatcatttcacgat
gaacaatggggtgttcctgtttatgatgacaacaaattgttcgagctgcttgcactgtct
ggtatgctgatggattataattggacagagattttgaaaaggaaagatctatacagagaa
tccttcttgggttttgatcctgaaattgttgctaaaatgggggataaggaaatccatgag
atatcatcaaacaaagcaatgatgttggcagagagtagagtaaggtgcatagtagacaac
gccaagtgcatactcaagatagtgaggcaatatggatccttcagcagcttcatgtgggga
tatgtgaattataaaccaaccatcaacaaatacaaataccccagaaatgttccacttaga
actccaaaagcggaagccattagcaaggacttagtgaagcatggattcaggtttgttggg
ccagtgattgtgtattcattcatgcaagcagcagggttgaccatcgatcatctggttgat
tgtttcagatacagtgaatgtgtaagcctagctgaaagaccatggaggcacatttaa
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