Gossypium arboreum (tree cotton): 108483911
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Entry
108483911 CDS
T05776
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108483911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108483911
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108483911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108483911
NCBI-ProteinID:
XP_017642936
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Position
8:complement(82788472..82793028)
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AA seq
476 aa
AA seq
DB search
MSENGKLFIGGISWDTHDERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFIVFSDPAVAE
KVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIHSSPGPARTRKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKNFHELNGKMVEVKRA
VPKELSPGPARSPLGVYNYGLNRSNSFLNGYTQGYTPSNLRGYGLRMDGRFSPVAAGRTG
FPPFGSGYGMGMNFEPGLNPGFGNSTNFNNYGRGLSPYYIGNTNRFGSPIGYDGSNGGGS
NTSFFSSVTRNLWGNGGLNYNANAASSSAYAGSGSGSIGTSAFGNSGINWSSSQISSQGG
RNNVSGNNVNFSYGSGDNSFGFGTAGHERNTGTNVVPTSSYAASNGSYDGAFADFYGGAS
FYRDTTWPSSTSERDGSGSFGYGLVSATSDVPGKSSPGYVGSYSVNKGQSNRGITT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtggaatctcttgggacacccatgacgagcgt
ctcaaggagtatttcagtagttttggtgaagttgtagaagcagtgatcatgaaggatcga
accacagggcgtgctcgaggtttcggtttcattgttttctctgacccagctgttgctgag
aaagtcatcaaggagaaacacaacattgatggcaggatggttgaggcaaaaaaggccgtt
cctagggatgaccagaacattatgagtagaagcactagtagcatccacagttcacctggt
cctgcacgcacaagaaagatttttgttggaggtttagcatctacagtcacagagagtgac
tttaagaagtattttgatcagtttgggaatatcacagatgttgtagtgatgtatgatcac
aacactcaaaggcctaggggttttggattcatcacttacgattcagaagaggcagtcgac
aaagtgttgctaaaaaatttccatgaactgaatggtaaaatggttgaggttaaacgagca
gttcccaaagagctgtcgccaggcccagctcgtagcccccttggtgtatataactatggt
ctgaataggagcaacagctttcttaatggctacactcagggatatactcctagcaacctt
cgaggatatggacttaggatggatggtagattcagtccagttgctgcaggtcgaactggg
tttcctccttttggttctggttatggaatgggaatgaactttgagccaggattgaaccca
ggttttggaaacagtacaaattttaataactatggacggggattgagcccttactatatt
ggaaatacaaataggtttggtagtccaattgggtatgatggaagtaatggaggtggaagt
aatacttcctttttcagctcggtgacccggaatctttggggaaatggagggcttaattat
aatgcaaatgctgctagttccagtgcctatgcaggatctggaagtgggagtataggaaca
agtgcttttggaaatagtggaattaactggagttcttctcagatttccagtcaaggtgga
aggaataatgtttctggcaataatgttaatttcagttatggaagtggtgataacagcttt
gggttcgggacagcagggcatgagagaaacactgggaccaatgtagtgccaacatcatca
tatgcagcatcaaatggcagttatgatggagcctttgcagacttttatggtggtgcttca
ttttacagggataccacttggccatcatcaacatctgagcgtgatggttctggttccttt
ggctatggacttgttagtgccacttctgatgttcctggtaaaagttctcctggttatgtc
ggcagttatagtgttaataagggacaatcaaatagaggaattactacctag
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