Gymnodraco acuticeps: 117557417
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Entry
117557417 CDS
T09661
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04140
Autophagy - animal
gacu04148
Efferocytosis
gacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117557417 (vps16)
04148 Efferocytosis
117557417 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117557417 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117557417 (vps16)
Membrane trafficking [BR:
gacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117557417 (vps16)
Hops complex
117557417 (vps16)
BRITE hierarchy
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
117557417
NCBI-ProteinID:
XP_034089141
EnsemblRapid:
ENSGAUG00000007334
UniProt:
A0A6P8VFP9
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MSFITANWNPLGEAFYRKTELYEMSWSLRDGLRDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVSIASFPWKSGPVVQVGWTVSDELLLVQEDGSVLIYDVFGTFKRHFSMGQ
EVVQSQVLEAQVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPVCWLVL
TQDRQTKVLLSTGPDLYILDNTSCTAVSPPGLGPQSGSIVHMSVSFSYKYLALFTETGHL
WTGPSHLQDKLNEVDTKNTNPPQQMVWCRRPKSQQPSVVLLWDKLLMVVGVRQDNIQFPI
EEPCVLVGELDGVRILSSSQQELLQEVPLVCQEIFKIASMAPGALLLEAHREYQKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDSITQKDLLRAASFGKCFLTDFVPDPFVLTCR
ELRVLNSVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYQVTASYREKRLDSRLSLLQSAVDEYNKAKNE
FSAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVDVCMKSNNRFEAKKYVSKVMPEQR
VRAHLAVSDLEGAADAAIERKNESEMALVLSRSSTSDRLLIDRLNRAATVAKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcatcacggccaactggaacccgctgggagaggctttctaccgtaagacggag
ctgtatgagatgtcctggtctctgagggacggactgagagacagtctggttgctgcagcg
ccgtacggaggacctatagctctcctcagagaacctcatagacgttccccgagttctcgt
cctcagctggagatttattctgcgtctggagtctccatcgccagcttcccgtggaagagt
ggtccagtggtccaggtgggctggacggtgagtgatgagctgctattggttcaggaggat
ggatcggttctgatctacgacgtcttcgggaccttcaagagacacttcagcatgggacag
gaagtggttcagtctcaggtgttggaggcccaggtgttccactctccttatggaacaggg
gttgccatagtaacgggttcctctcgattcaccttggcgaccaacatcgacgacctaaag
ctccggaggttacctgaggtcccaggtctccaggggaagcctgtctgctggctggttctg
acccaggaccggcagactaaagtcctgctgtccaccggaccggatctctacatcctggac
aacacgtcctgcaccgcggtgagtcctccaggtctgggtcctcagtctggcagcatcgtc
cacatgtccgtctccttcagctacaaatacctggctctgttcacagagaccggacacctg
tggacaggcccctcccaccttcaggacaaactgaatgaagtggacaccaagaacacaaac
cccccccaacagatggtctggtgtcgcaggccaaagagtcagcagccgtctgtggttctg
ctgtgggacaaactgctgatggtggttggagtccgtcaggacaacatccagttcccgata
gaggaaccctgtgttctggtgggagaattggacggggtccggatcctcagctcctctcag
caggaactccttcaggaggttcctctcgtctgtcaggagatcttcaagatcgcctccatg
gctcctggagctcttttgctggaggcccaccgggagtaccagaagtccagtcagaaggct
gatgagtacctgagggagataaaggagcaaagcatgctgggagaagcagtccgtcagtgt
gtggaggcggcaggacacgagtacgactccattacccagaaggacctgctcagggcagcg
tcctttgggaagtgcttcctgacggactttgttcccgacccgtttgttctgacctgcaga
gagctgagggttctgaactcagtgagagagagcagcgtgggtctgcctctcacccacact
caattcaaacagatgactctacaggtgctgatcgacaggttggtgtacagacaattttac
ccgttagcgatagagatctgtcgttacctgaagattccagattaccagggagtcagccga
gtcctcaagcactgggcctcctgcaaggtgcagcagaaggacctgacggatgaggcgatt
gcccgggcggtatgtgtgaaggtgggagactcacctggtgtgtcttactctcacatcgca
gctaaagcctacgagtgtggccgcacggagctggccatcaagctcctggactttgaggcc
cgctctggagaacaggttcctctgctgctgaagatgaagaggagtcagctggccctcagt
aaggctgtggagagcggagacaccgacctggtgtacacggtggtgacgtacctgaagaac
gagatgaacagaggagatttcttcatgaccctgaggaaccagcctgtggctctgagcctc
tacagacagttctgtaagctgcaggaacaggaaactctgaaggacctgtataaccaggac
gacgatcaccaggaactggccaactaccaagttactgccagctacagagagaagaggttg
gacagccgtctgtctctcctgcagagcgctgtggacgagtacaacaaggcaaagaacgag
ttctcagcaaaggccacagaggacgagatgcgtctgctgagattccaacgcaaactagac
gatgagaaaggggcggggcttctgggactttctctacaggccaccatggaggctctgctg
gctctgggtctccacaaacaggcggagcagctctacagagacttcagagttcctgacaag
aggtattggtggctgaagctgaagtctttggcggagaaagaggagtgggaggagctagag
aagttctccaagagcaagaagtctcctattggctacttggcgtttgtggacgtctgcatg
aagagcaacaacaggtttgaagccaagaagtacgtctccaaggtaatgccggagcagagg
gtcagagcacacctggccgtcagcgacctggagggagcggcggacgctgccatcgagaga
aagaacgagtcagagatggcgttggttctttctcgaagctccacctccgaccggctgctc
attgaccggctgaaccgcgccgccaccgtcgccaaaaagtga
DBGET
integrated database retrieval system
