Gigantopelta aegis (peltospirid snail): 121374955
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Entry
121374955 CDS
T07458
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03013
Nucleocytoplasmic transport
gae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121374955
09122 Translation
03013 Nucleocytoplasmic transport
121374955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121374955
03041 Spliceosome [BR:
gae03041
]
121374955
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121374955
Spliceosome [BR:
gae03041
]
Complex C
Other components
EJC/TREX
121374955
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121374955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Thymidylate_kin
Motif
Other DBs
NCBI-GeneID:
121374955
NCBI-ProteinID:
XP_041358036
LinkDB
All DBs
Position
6:complement(78342070..78374500)
Genome browser
AA seq
659 aa
AA seq
DB search
MAAPSDFDFYEGREIFKAAIQKSIADDTTQNCLAFIAKYPGSDPEKKSAMDQALRDLLKW
AIVSDQGIEGFKVLINFAIEAGLKDAVSPSTPFVMMSDIFDMLTLKACEDIFSLVEDRVT
TWKSPTFYDAGKNYLLRMCNDLIRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMSQF
NLENVTVFDTKLEDTRHVKIEDKTIKEENMEVEEGEMDESSSTAPIDYALYRRFWSLQDY
FRRPTQCYEKVPWKHFVLNADEVLTAFDSLKLDDLKSQRKKLDKPRQTDTQTFFAKYLTS
KKLLDLQLSDSNFRRYVLVQFLILFQYLNSQVKFKTASMVLTDEQSAWLKNVEEKVYQLI
RETPPDGTQFAKTIEHILQREENWNSWKNDSCQSYERQTQKDAVKPKAKARRRRIGDDLQ
ASGGKIIKMGSNELTRLWNLNPNNTDACRSDKRIFLPGIEEYFGEAIEQIDPEAQVEDEY
KLINQRAFQWKSLRLLARKSPHFFTHSTSPSLPLPKYLENILSKLAKELPNQNSSDDMKT
EMEEEDSIKEAQEEEDLKNNEEQNNKDESPEEVLTDDQKLAVAEKLGDDWKKLATELNFP
EDEISYLESSEDQPTIPGVRMLSLWQENDTEHATIGALIVALKEIGHEDVVIDIFEDKS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccagcgacttcgatttttatgagggtagagaaatattcaaggcagccatt
cagaagagtattgcagatgacacaactcagaattgcttggccttcattgccaaatatcca
ggaagtgatccagaaaagaaatcggccatggaccaagcactaagagatcttctgaaatgg
gccatagtttctgatcaaggaattgagggattcaaagtgttaataaactttgctattgaa
gctggtttaaaggatgctgtttcgccatccacaccatttgtgatgatgtcggacatcttt
gacatgctgacactcaaggcctgtgaagatattttcagtctggttgaagatcgtgtcaca
acgtggaaaagtcctacattttacgatgctggaaagaactacctgcttcgaatgtgcaat
gatctgattcggagactttccaaatcccaaaacacagtattctgtggaagaatccagttg
tttctatcccgactatttccactgtccgaaaaatcagctttgaatttgatgagccagttt
aaccttgagaatgtgacagttttcgatacgaaattagaggataccagacatgttaaaatt
gaagacaaaactatcaaagaggaaaacatggaagttgaagaaggagaaatggatgaatct
tcaagcactgctccaattgactatgccctctacagaagattttggtcattacaagactac
tttagacgaccaacacagtgctacgaaaaagttccttggaaacattttgttttgaatgca
gatgaagtgttgacagcatttgacagtttaaaactggatgatctcaagtcacagaggaag
aaacttgacaaacccagacagacagacacacagacattctttgcaaagtatctcaccagt
aagaagttgctagacctccagttaagtgacagtaacttcaggagatatgtgcttgtccag
ttccttatcctgttccagtatttaaattctcaagtcaaattcaagactgccagtatggtt
ctaacagatgaacaaagtgcgtggctgaagaacgtggaagaaaaggtttaccagttgata
agagaaacaccacctgatggtactcagtttgctaagaccattgagcacattcttcaaaga
gaagagaactggaacagttggaagaatgatagctgtcagagttacgagagacaaacccag
aaggacgctgtaaagccaaaagccaaagcccggcgccggcgcattggtgatgatctacag
gcgagtggcgggaagatcattaaaatgggaagtaacgagctcactcgactctggaatctc
aacccaaataacactgacgcctgcaggtcagacaagagaatatttctgcctggtatagaa
gaatattttggagaagctattgaacagattgaccctgaagcacaggttgaagatgagtac
aaactaattaatcaacgagcatttcagtggaaatctttacgactgttggcacgaaagagt
cctcattttttcactcacagtacttcacctagcctgccactgccaaagtatcttgaaaac
atcctgtccaaattggccaaagaattaccgaatcagaattcctctgatgacatgaagaca
gaaatggaggaagaggattcaatcaaagaagcacaggaagaagaagacctaaagaataac
gaagaacagaataacaaagatgaatcgccggaggaagtcttgacagacgaccagaagttg
gcggtcgcagaaaaactcggtgatgactggaagaaactggcgactgaactaaacttcccg
gaggacgagatttcctatctagagagctctgaggaccagcccaccattccgggtgttaga
atgctctctttatggcaggagaatgacacagaacatgctaccattggtgcgctgattgtt
gccttaaaggagattggacatgaagatgttgttatagatatatttgaagacaaaagttag
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