Gambusia affinis (western mosquitofish): 122819563
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Entry
122819563 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122819563
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122819563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
Baculo_IE-1
MutS_III
WDCP
zf-RING_11
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
122819563
NCBI-ProteinID:
XP_043952303
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All DBs
Position
LG17:17787571..17790760
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AA seq
556 aa
AA seq
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MAQKGLQLDEDKYSCSICLDLLKDPVTIPCGHSYCMGCIKTHWEEEDHRKIYSCPQCREA
FKRKPVLKKSTILADLVEDLKKTRVQADPDDLFYARPGDVACDVCTQRKLKAVKFCLTCP
AFYCEYHLQPHYDAPPLQKHKLVDPSKKLQENICPHRGEAMEMSGHPDQQGTCFLCLTDE
NKDHKKGSAAAEISGKQKKLLVRRQQIQKGIWDREKEVKLLRQEVEAINASADKAVEDSE
KIFTELIRLAWKRSADVQQQIRSQQESEVSRVRELWEKLESEITELKKKDAELEKLSTSD
NNRFLLNYPSLTKPSDATHSSSIKIRPLRYFEDVTTTVSELRDKLQDILRDTWTDISDAV
AEVDVLLSEPEPKTRAGFLKYSQEITLNPNTANNHLLLSDGNRKATVLKQKQLYSDHPDR
FTGWLQILSRESLTGRCYWEVEWKGRRVDIAASYKSISRAGNVDDCEFRSNYKSWSLYCD
RNGYTFWHNRIKSPVSGPVSSRVGVYLDHRAGNLSFYSVSGTMTLLHRVQATFAEPLLAG
VGFYKDGISAELLKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggacttcagctagacgaggacaaatattcttgttccatctgtttggat
ctgctgaaggatccggtgaccataccctgcggacacagctactgtatgggttgcattaaa
acccactgggaagaagaggatcacaggaaaatctacagctgccctcagtgcagggaggct
ttcaaaaggaagcctgttttgaaaaaaagcacaatcttagcagatttagtggaggatctc
aagaaaaccagagtccaagctgatccggatgacctcttctatgccagaccaggagatgtg
gcttgtgatgtttgcactcaaaggaagttgaaggctgttaagttttgtttaacctgcccc
gcattttactgcgagtatcacctccaacctcactatgacgctccacctttacaaaagcac
aagttggtggacccctccaagaagctccaggagaacatctgtcctcatcgtggtgaggcg
atggagatgtccggtcaccctgatcagcagggtacctgctttctctgcttgacagatgaa
aataaagatcataagaaaggatcagctgctgcagaaatttctgggaagcagaagaagctt
ctggtgagacgacaacaaatccagaagggaatctgggatcgggagaaagaagtgaagcta
cttcggcaggaggtggaggccatcaacgcttcagctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcgcctggaaaagaagtgctgatgtgcagcagcag
atcagatctcaacaggaaagcgaagtaagtcgagtcagagagctttgggagaagctggag
agtgagatcaccgagctgaagaagaaagatgctgagctggagaagctctcaacctcagat
aacaaccggttcctactcaactacccctcactgacaaaacccagtgatgcgacacactca
tccagcatcaaaattcgtcctctgaggtactttgaggatgtgacaactactgtgtcagag
ctcagagataaactacaagacatcctgagagacacatggacagacatctcggatgcagtc
gctgaagtggacgttttactgtcagaaccagaaccaaagactagagctggattcttaaaa
tattcgcaagaaatcactctgaatccaaacacggcaaacaaccatttgttattatctgat
gggaacagaaaagcaacggtactgaaacagaaacagctttactctgatcacccagaccga
ttcaccggctggctccagatcttgagcagagagagtttgactggacgctgctactgggag
gtggagtggaaagggaggcgagttgacattgcggcttcatacaagtcaatcagcagagca
gggaacgtagatgattgtgagtttcgatctaactacaaatcttggtctttgtattgtgac
agaaacggttacaccttttggcacaacagaataaaatctccagtttcgggtcctgtttcc
tccagagtaggagtgtacctggaccacagagcaggtaatctgtcgttctacagcgtctct
ggaaccatgactctcctccacagagtccaggccacattcgctgagccgctcctcgctgga
gttgggttttataaggatgggatttctgctgagttgctgaaactgaaatag
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