Gambusia affinis (western mosquitofish): 122820969
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Entry
122820969 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122820969
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122820969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
Gp58
MRP-S31
Motif
Other DBs
NCBI-GeneID:
122820969
NCBI-ProteinID:
XP_043954672
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Position
LG18:complement(22910097..22911804)
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AA seq
561 aa
AA seq
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MAQRGNQMDSGKYSCSICLDLLKDPVTIPCGHSYCMNCIKDHWDGEDQRIHSCPQCRKEF
IPRPKLEKNIMLAELVEDLEKTGLQAATADHCYAGHEDVTCSVCPGRKLKAVKSCLVCLV
SYCENHLQPHVDVPGLKKHKLVNPSKKLQQNICPHHEEVMKIFCRTDQQCICYLCTMDEH
KNHETVPAAAERAEKQKELQESRQQIHQRIQDQEKDVKLLQQEVEAINVSADKAVEDSEK
IFTELIRLLQERSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTED
HTQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDKLKDVLRDPGTNIKLAV
TGVDVLLSEPEPKTRDEILKYSKKITLDTNTANRYLVLTEGNRKATFVSSCLPYPDHPDR
FTGWSQVLSRESLTGRCYWEVEKRGIHVYIAVSYKDIRREGWSDKCQFGSNCKSWSLYCG
RKTYRFSHNNIKTPVSGPVSSRIGVYLDHRAGILCFYSVSEAMTLLHRVQTTFTEPLYAG
VWLDLSFFSLSECSSEFIKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaggaaatcagatggattcaggaaaatactcctgttccatctgtttggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgcattaaa
gaccactgggatggagaagatcagagaatccacagctgccctcagtgcaggaaagagttc
ataccaaggcccaaactggagaaaaacatcatgttagctgaattggtggaggatctggag
aaaactggactccaagctgctacagctgatcactgctatgctggacatgaagatgtgacc
tgcagtgtctgccccgggaggaagctgaaagctgtcaagtcctgtctggtttgtttggtt
tcctattgtgagaatcaccttcaacctcacgttgacgtccctggattaaagaaacacaag
ctggtgaatccctccaagaagcttcagcagaacatctgcccacatcacgaggaggtgatg
aagattttctgtcgtactgatcagcagtgtatctgttatctctgcactatggatgaacat
aaaaaccatgaaacagtcccagctgcagcagaaagagctgagaaacagaaggagctccag
gagagtcgacaacaaatccatcagagaatccaggaccaagagaaagatgtgaagctgctt
caacaggaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgagaag
atcttcactgagctgatccgtctcctccaggaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcag
gagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggat
cacacccagtttctcctcaactacccctcactgccagcactcagtgagtctacacactca
tccagcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagag
ctcagagacaaactaaaggatgttctgagagacccagggacaaacatcaagctggcagtc
actggagtggatgttctactgtcagaaccagaaccaaagacaagggatgaaatcctaaaa
tactcaaaaaaaatcaccctggatacaaacacagctaacagatatttggtattaactgag
ggaaacagaaaagcgacatttgtgtcttcatgtctgccttatcctgatcatccagacaga
ttcactggttggtctcaggtcttgagtagagagagtctgactggacgttgttactgggag
gtggagaagagaggaatacatgtttatatagcagtatcatacaaggacatcagaagagaa
ggatggtctgataaatgtcaatttggatcaaattgcaaatcttggtcattatattgtggc
aggaaaacttatagattttctcacaacaacattaaaactccagtatcaggtccagtttcc
tccagaataggagtgtatctggatcacagagcaggtattctgtgtttctacagcgtctct
gaagccatgactctcctccacagagtccagaccacattcactgagcctctatatgctggg
gtttggcttgacctctcatttttctctttgtcagaatgttcttctgagtttattaagctg
aagtag
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