Gambusia affinis (western mosquitofish): 122820978
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Entry
122820978 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122820978
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122820978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
PRP1_N
Atg2_N
MIC19_MIC25
LMBR1
Motif
Other DBs
NCBI-GeneID:
122820978
NCBI-ProteinID:
XP_043954683
LinkDB
All DBs
Position
LG18:complement(23320468..23323528)
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AA seq
554 aa
AA seq
DB search
MKVKKTPSKTKLQQEAISCSICLNPLKRPVTIACGHSYCMRCINLYWNGEDHSRVYICPQ
CRQNFTPRSILVKSTMLAVLVEQLKETGLSKTPADHCYAGPEDVACDVCSWRKMKAVKSC
LVCLVSYCKEHVKPHYKSAFDKHKLVNPSKKLQQNICSRHDEAMKIFCRTDQQCICYLCT
MDEHKGHETVPAAAERAEKQKKLQVSLHHIHQRIQDRENDVKLLQQEVEAINVSADKAVE
DSENIFTELIRLLQERRSEVKQQIRSQQETEVNRVKDVQEKLEQEITELKRKDAELEQLS
HTEDHNQFLLNYPSLPALSESTHSSSIKIRPLRHFEDVTAAVSELRDKLKKILRDPWTNI
PVTVNEVDVPLSEPEPKTRDEFLRYSQEITLDPNTAHRNLILSEGMTKVTLIDQQQFDSD
HPNRFTDYYQVLSNESLTTRCYWEVEWSGELVYVAVSNKNISRAGGFGLNNKSWTICCTT
DKYTFHHKGIPTPVPGPVSSRIGVYLDQKAGILSFYSVSETMTLLHRVQTTFTQPLHAGI
CLFGDSSAEFIKPK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaaaagacacctagcaagacaaagttgcagcaggaagccatctcctgctca
atctgtctgaacccactgaagcgaccagtaactatcgcctgtggacacagctactgtatg
agatgcataaatctctactggaatggagaagatcactctagagtctacatctgtcctcag
tgcagacagaatttcactccgagatccattctggtaaaaagcacaatgttggctgtttta
gttgagcagctgaaggagactggactcagtaaaactccagcggatcactgctacgctgga
cctgaagatgtggcttgtgatgtctgctcttggagaaaaatgaaagctgtcaagtcctgc
ctggtctgtttggtgtcttactgcaaagaacatgtcaaacctcattataaatctgctttt
gataaacacaagttggtgaatccctccaagaagctccagcagaatatctgctctcgtcat
gatgaggcaatgaagatcttctgtcgtactgatcagcagtgtatctgttatctctgcact
atggatgaacataaaggacatgaaacagtcccagctgcagcagaaagagctgagaagcag
aagaagctccaagtgagtctccaccatatccatcagagaatccaggaccgagaaaatgat
gtgaagctgcttcaacaggaggtggaggccatcaatgtctctgctgataaagcagtggag
gacagtgagaatatcttcactgagctgatccgtctcctccaggaaagaagatctgaggtg
aagcagcagatcagatcccaacaggaaactgaggtgaatcgagtcaaagatgttcaggag
aagctggagcaggagatcactgagctgaagaggaaagacgctgagctggagcagctctca
cacacagaggatcacaaccagtttctcctcaactacccctcactgccagcactcagtgag
tctacacactcatccagcatcaagatccgtcctctgagacactttgaggacgtgacagca
gctgtgtcagagctcagagataaactaaagaaaatcctgagagacccatggacaaacatc
ccagtgacagtcaatgaagtggatgttccattgtcagaaccagaaccaaagacaagagat
gaattcttaagatattcacaagaaatcactctggatccaaacacagcacatcggaatttg
atattatctgagggaatgaccaaagtaacattaattgatcaacaacagtttgattctgat
catccaaacagattcactgattattatcaggtccttagtaacgagagtctgactacacgt
tgttattgggaggtggagtggagcggagagttagtttatgtcgccgtttcaaacaagaac
ataagcagagcaggaggatttggactcaataacaaatcttggacaatatgttgtaccaca
gacaaatacacatttcatcacaaaggcattccaactccagtaccaggtccagtttcctcc
agaataggagtgtacctggatcagaaagcaggtattctgtctttctacagcgtctctgaa
accatgactctcctccacagagtccaaacaacattcactcagccgctacatgctgggatc
tgcctgtttggtgactcctctgctgaattcattaaacctaagtag
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