Gambusia affinis (western mosquitofish): 122821567
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Entry
122821567 CDS
T07758
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122821567 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122821567 (usp47)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122821567 (usp47)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122821567 (usp47)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122821567 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
122821567
NCBI-ProteinID:
XP_043955551
LinkDB
All DBs
Position
LG02:16642139..16662938
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AA seq
1355 aa
AA seq
DB search
MEMVPSEENQFVPKEIHNAAEEPRVLCIIQDTTSAKTVNERLTFNLPASTTLSKLYEDVA
HKAGYVNGSFDLTWGNTQNMAPLEHNSEMSLSDSSFEPDGKKNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERFIGPLQRDGSAGGSGDYSPSYSYSSILSKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPITSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERALKPKSLLTFELFSVMVHSGSA
AGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
IYRLKDPSRNSRFLAVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCVHPVKM
MMESKLEVHKDKTLREATEMAYKLMDLDGVVPLDCCRLVKYDEFHEYLERSYEGEEDTPM
GLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVVDLKTETIALPISVRAYLNQ
SITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSELT
DHQLPFTDSLLWKLLDRHGNTIRLFVLLPEQSPGTLASRTLCQKAGEDSDGPFEGSKGNR
KSVEAILEESTEKLKNLSLQQQQGSSAGDSQKSSDTSDFEHIESPTQEADSNSSLCVAAD
SRELENRISGSSDTENQFVCEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQ
LANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKRKAEAQYLYFRAEPYS
QDDASWETHKCLVVHVDKRITLAAFKQNLEPYVGVPSSQFKVFRVYANNQEFESVRLNET
LSSFSDDNKITIRLGRALKKGEYRVKVFQLLVNEPEPCKFLVDTVFAKGMTVRQSKEELL
PQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEVLDDSEKMK
SMSQLAILTRKWNPATMKLGPFQEAILESSSVEELKEKLSEMSDIPLENLEFAKGRGTFP
CDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDNRDEPLELSEDERNELMKKES
SRLLKTGHRVSYSPRKEKALKIYLDGGPVRDPGQD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagatacataatgcagct
gaggagcccagagtgctgtgcataattcaggacacgaccagcgcgaagacggtcaacgag
aggctgaccttcaacctgcccgcttccaccactctctccaaactttacgaggacgttgcc
cataaagccggatatgtgaatggctcttttgacctcacctgggggaatactcagaacatg
gcaccgctggagcataacagtgagatgtccctctctgattctagctttgagcctgacggt
aagaagaattttctccagcttacagataaagatggagagcaaccacagattgcctcggat
gagtcaggaacagcagatagcagtgggctggatgacagttcccaggagcggtttatcggc
cccctgcaaagagacggcagcgcgggcggcagcggtgactacagtccatcgtactcctac
tcttccatcctcagcaaatctgagacaggttatgttggtttggttaaccaagcaatgacc
tgctatttgaacagtctcctccaaacactgtttatgactcctgagttcagaaatgctctc
tacaattgggagtttgaggagtctgaggaggatcccatcaccagtatcccctaccagctg
caaaggctctttgttctgctgcaaaccagtaagaaacgggcgattgagacgactgatgta
acccggagcttcgggtgggatagcagtgaggcctggcagcagcatgacgtccaggaactg
tgcagggtcatgttcgatgccctggagcagaagtggaagcagacagaacaggctgatctg
atcaaccagctgtaccagggaaagctgaaggattatgtgcgttgtttagagtgtggatat
gagagctggaggatcgacacttacctggacatccctcttgtgatcagaccctttggagcc
agtcaggcctacggaagtgtggaagaagctttgcaggcattcatccagccagaaaccttg
gacggccccaaccagtacttctgtgagcgctgcaaaaagaaatgtgacgccagaaagggt
ctgaggtttctccacttcccctacctgctgacgctgcagctgaaaagatttgattttgat
tacaccactatgcatcgcatcaagcttaacgaccgcatgactttccccgaggagctcgac
atgagcccgttcatcgatgtggaagatgagaagtcgcctcagacagagagctgcactgat
agcggagcagagaatgaaggcagttgccacagtgaccaaatgagcaatgatttttccact
gatgactgtgtggatgagggcatctgcttggacagcaccagtagcacagaaagggcattg
aagccaaagagcttgctgacctttgagttgttctccgtcatggtccattcgggcagcgct
gcgggcggacactactacgcctacatcaagtccttcagtgatggccagtggtacagtttc
aatgatcagcacgttagcaagatcacccaggacgatatcaggaagacatatggggggtcc
tcagggagcagaggctattattccagtgcctttgcaagttccacaaatgcttacatgctg
atttatagattgaaagatccctcaaggaattcaaggtttttagctgtggaagacttccca
gagcacataaagagtttggttcagaaggagaaggaatccgaagagcaagagaagcgccag
agagaaatcgaacgaaacacttgcaagatcaaactcttctgtgtgcatcctgtcaaaatg
atgatggagagcaagttggaggttcataaagataaaactctcagagaagcaacagaaatg
gcctacaagttgatggatctggacggagttgtgcctctggactgctgtcgcttggtaaag
tatgacgagttccatgagtatctggagcggtcgtacgaaggcgaggaagatacccccatg
gggctcctgcttggaggtgtcaagtcctcgtacatgttcgatttgctccttgagactcgc
cggcctgatcaggtcttccagccgtataaacctggagaggtgatggtgaaggtccatgtt
gttgatctgaagactgagaccatcgcccttccaatcagcgtgcgagcgtacctgaaccag
tctatcactgaattcaagcagcttatagctcaggctacaggtctgtctgcagaaacgatg
cgtgtggtcttggagcggtgctataacgacctcagactgctctacgtcccaaacaagacg
ctaaaagccgagggtttcttcaggagtaacaaggtttttgtggagagctcggagttgact
gatcaccagcttccttttaccgactcgctcttgtggaaactgttggatcgccacgggaac
acgatccgcctgtttgtcttgctgcctgagcaatctcctggcaccctggccagcagaact
ctttgtcaaaaagcaggagaagactctgacggtcccttcgaagggtcgaagggcaacagg
aaatctgtggaagcgatactggaggagagcacagagaagttaaagaacctgtctctgcag
cagcagcagggctccagcgccggcgacagccagaaaagttccgacaccagcgactttgaa
cacatcgagtcgccgacgcaagaggcggactcgaactcttcgctgtgcgtggcggcagac
agcagggagctggagaaccggatatccggctcctccgacacggagaaccagtttgtttgc
gaggagcgttcagactctgaggtgaacaatgaccgtagcacaagctcagtggacagcgac
atcctgagctccagtcacagcagcgacacgctgtgcaacgcggacagcggccccatccag
ctggccaacggcctggattcacacagtatcaccagcagccggcgctccaaagcccacgag
ggcaaaaaggagacctgggacactgcggaggaagattctgggaccgacagcgagtatgac
gacaacgggaagagaaaggcagaagctcagtacctgtacttcagagcagagccttactct
caggatgacgcttcttgggagacacacaaatgtttagtggttcacgtggacaagagaata
actttggcagcgttcaagcagaacctggagccctacgtcggagtcccgtcgtcccagttc
aaggtgtttcgagtttacgccaacaaccaggagtttgagagcgtacggctcaacgaaacg
ctctcatcgttctccgacgacaacaagataaccattcgactgggaagagcattaaaaaag
ggtgaatacagagtcaaagtgtttcagctcctcgtgaatgaaccagagccttgtaagttt
ttagtggacacggtgtttgctaagggcatgactgtaagacagtccaaagaggagctgctt
cctcagttgaaagagcagtgcaagctcgacctcagcatcgacagggttcgtctcaggaaa
aagacgtggaagaatccaggaacggtgtttttggattaccacgtttacgaggaagacatc
agcatttcctcaaactgggaggttttcctggaagtcttggatgattcagagaagatgaag
tccatgtcgcagctggccattttgacccggaagtggaacccagctactatgaagctggga
cctttccaggaagccattctggagagcagcagtgtggaagaactaaaggaaaagctcagt
gaaatgagtgatattcccctggagaacttggaatttgcaaagggcaggggaacgtttcca
tgtgatatatccgtgttggaaatccatcaggatttggactggaacccaaaagtttcgact
ctgaatgtgtggcccctgtacatctgtgacgatggagccgtggtcttctacagggacaac
agagacgaacctctggagctgtcggaggacgagcgcaacgagctgatgaagaaggaaagc
agccgcctgctgaagacgggacaccgcgtcagctactcgccacgcaaagagaaggccctc
aagatctacctggacggcggccccgtgagggacccggggcaggactga
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