Gambusia affinis (western mosquitofish): 122822132
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Entry
122822132 CDS
T07758
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122822132
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122822132
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
122822132
NCBI-ProteinID:
XP_043956496
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All DBs
Position
LG19:complement(5503908..5572037)
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AA seq
462 aa
AA seq
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MLMSTDVASIMLPVNRGIMERDRDLETAAGGAHLNAAAGAAVVRGMKRGDPEPDAQTAAA
LTDLTGAECKRPRIDGSGEIGQNNEPLNPGFHGYAPHSQGSQDSTGGQEGLVAPPFTTFP
PPPPPQNGLPGTEFDPGAMFAAAGQSAVEVGAGANGATTTANSNNNGKTEETSQGEAGAQ
CSAGGTGAGGSMGDSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
SKGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKIVSPYPNGEALSTL
PYAGWKLSPMVGAVYGPEIYAVPGFPYPTAAAAAAATTAAAAFRGAHLRGRGRPVYSAVR
AAVPQPAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAY
SDSYGRVYTTDPYHALTPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccataatgctgcccgttaatcggggaataatggag
cgcgacagggatctcgagacggcggccggcggagcgcatctgaacgcggccgccggagcc
gcggttgtccgggggatgaagcgcggagacccggagcccgacgctcagaccgccgctgcc
ctgactgacctgaccggggcggaatgcaagagaccgaggatagacggctccggtgagatc
ggacagaacaatgagcctttaaaccccggtttccatggatacgcacctcacagtcagggc
tcccaggactcaaccggagggcaggagggtttagtagccccgccctttacgaccttcccc
ccaccaccccctcctcaaaacggcctaccggggacggagtttgatccgggggccatgttt
gccgccgcgggccaaagtgcagtggaggtcggagcgggtgctaacggagccacgactaca
gccaacagcaacaacaacgggaagacggaggagacgtctcagggcgaggcgggtgcgcag
tgttccgcaggaggcacaggagcgggcggctcaatgggagactccgcggaggccaagggg
acccccaagcgcctccacgtgtccaacatccccttccgcttccgggacccggacctcagg
cagatgtttgggcaatttgggaagattctggatgtagagattattttcaatgagagaggg
tcgaagggtttcggctttgtgacatttgaaaacagcgccgacgcggagaaagccagagaa
aagctccatggcacgctggtggagggccgtaaaattgaggtgaataatgccaccgccagg
gtgatgactaacaagaaaatcgtcagcccttaccctaatggagaggctctcagcacgctg
ccctatgcagggtggaagctaagtcccatggtgggagcggtgtacgggccagagatctac
gcagtccctgggtttccctacccaaccgcagcggcggcagcggcagccacgacggcggcg
gcggcgttccgcggcgcccatctcagaggccgaggccggcccgtttacagcgccgtcagg
gcggccgtgcctcagcccgccatccctgcgtaccctggcgtggtgtatcaggatgggttt
tacggagctgcagacttatatggaggctaccctgctgctgctgccgccgccgccgccgcc
gcatatcgctacgcccagcctgctgccgtaaccggagcaacagccgcagctgccgcctac
agtgacagttatgggcgggtatacactacagatccgtaccacgctttaactccagctgct
gctgcttacggagtgggagccatggctagtttataccgggcgggatacagtaggtttgct
ccttactaa
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