Gambusia affinis (western mosquitofish): 122827045
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Entry
122827045 CDS
T07758
Symbol
farp1
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1 isoform X1
KO
K17477
FERM, RhoGEF and pleckstrin domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122827045 (farp1)
Protein phosphatases and associated proteins [BR:
gaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122827045 (farp1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
IQ_SEC7_PH
PH_11
PH_13
PH_20
Motif
Other DBs
NCBI-GeneID:
122827045
NCBI-ProteinID:
XP_043965509
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All DBs
Position
LG24:3393748..3439022
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AA seq
1046 aa
AA seq
DB search
MSELTERPSTAGQRLGAPESFGVSTLEPGMRPPVQPPGRQLSIRVQMLDDTQEVFQISQR
APGKMLFDLVCVHLNLTEGDYFGLEYTDHRKMTVWLDLLKPALKQIRRPKNTILRFVVKF
FPPDHTQLMEELTRYLFALQIKRDLACGRLICNDTSSALMVSHIIQSEIGDFDETQSWQH
LLHNKYLPDQDAIRDKIIDCHRQHVGQTPAESDYQLLEIARRLEMYGVRLYPAKDREGTK
LSLTVAHTGVLVFQGYTKINAFNWSKIRKLSFKRKRFLIKLRADPSQNSHHDTLEFAMAS
RDCCKVFWKICVEYHAFFRLFEEPKPKPKPILFTRGSSFRFSGRTQRQIIDHLKDSELKK
VPFERKHSKVLSSSSMSPHSSSFRSQVPKESATSILLADQPDSAKTNGTEEPPTNGFPDG
ALSSDPSRQNQNGAGQHLLNPGGSDSKESPQESPQLVPNGGGPGEDQERGVTAMADVCQI
PGGHPLSPLTSPLLIEAGYVRHDDEEEARRKKFPTDKAYFMAKELLTTERTFLKDLQVIT
EFFQKAAGKDEAFPDSVKNLISSHYDPVYKFHQGFLKETEQRLAQWEGRSNAHIKGDYQR
IGDVLLKNIQGLRQLTVHLQKHSECLVELERACRSSRKVEAVCRDFEQQRVCYLPLYIFL
LRPLHRLLHYKLILERLCKHYPPTHDDFRDSRAALAEISETALQLQGIMMKMENFQKLLE
LRKDLTGVENLVTPGRVRLPPRCLLLRSAGLQLTGRVCVCGLQEFIRLGCLSKLSGKGLQ
QRMFFLFSDCLMYTSRGTTPSNQFKVHGQLPLYGMTIRESEEEWGVPHSFTLFGQRQSVV
VAASCAAEMERWVEDIRMAIDLAEQSSGPNAELLSTSPPDTKPLEDAGAELESEEELCGS
RSSLERQSHRGNTTVHVCWHRNTSVSMVDFSVAVENQLSGNLLRKFKNSNGWQKLWVVFT
NFSLFFYKSHQDEYPLASLPLLGYSVTVPAESENIHKDYVFKLHFKSHVYYFRSESEYTF
ERWMEVIRSATCSASRPLLSSRKDLY
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgaccgagaggccatccacagccggacagcggctaggcgccccggaaagc
ttcggagtgtccaccctggagcccggcatgcgtcctccggtccagcccccgggacggcag
ctttccatacgggttcagatgctcgatgacacgcaggaggtcttccagatatcccaacgt
gcgcctgggaaaatgctttttgacctggtctgtgtccacctcaacctgactgaaggcgac
tattttgggctggagtacacggatcaccggaaaatgacggtgtggctggacctcctgaag
ccggcgctgaagcagatcagacgacctaaaaacaccatccttcgctttgtggtgaagttc
ttccctcctgaccacacgcagctcatggaggagctgactcggtatctgtttgccctgcag
atcaaacgcgacctggcctgcggtcgtctgatctgcaatgacaccagctccgccctcatg
gtttcccacatcattcagtctgagatcggggactttgacgagacgcagagctggcagcac
ctgctgcacaacaagtaccttcctgaccaggacgccatcagagacaagatcatcgactgc
caccgccaacatgtagggcagactccagcggagtcggactaccagctgctggaaatcgct
cggcgcctggagatgtacggcgtccggctgtaccctgccaaggacagagaggggacgaag
ctcagcctgacggtggcacacaccggggttttggttttccagggttacacaaaaatcaac
gctttcaactggtccaagattcgcaagctgagcttcaagcgtaaaaggttcctcatcaaa
ctgagagccgacccctctcagaactcccaccacgacacgctggagttcgccatggccagc
agggactgctgcaaggtattctggaagatctgcgtcgaataccacgccttcttcagactg
tttgaggagcccaaacccaaacccaagcccatcctcttcaccaggggttcctcgttccgg
ttcagcgggagaacgcagaggcaaatcatcgaccacctgaaagactctgagctgaagaaa
gtcccgtttgagaggaaacacagcaaggttctgtccagcagcagcatgtcgccgcactcg
tcttccttcagatcccaagtgccaaaagagagtgctacatctattctgttagcagaccag
cccgactcggccaaaaccaacggcaccgaggagcctcccaccaacggtttcccagacggc
gccctcagctcggacccgagccgacagaaccagaacggagcgggccagcacctcctgaac
ccaggcggctccgattccaaggaatctcctcaggaaagtccccagctggttccgaacggc
ggcggcccaggggaggatcaggagaggggcgtcaccgccatggcggatgtgtgtcagatt
ccagggggtcatccgctgtcgccgctcaccagcccgctgctcattgaggctggatatgtc
cgccatgatgacgaagaggaggcgaggaggaagaagtttcccacagacaaagcgtacttc
atggccaaagagctgctgaccacagagcggacgttcctgaaggacctgcaggtgatcact
gagttcttccagaaagctgcagggaaagatgaagcctttccagactccgttaagaacctg
atctcttcccactacgatcccgtttacaagtttcaccaggggtttctcaaagagacggag
cagcggctggctcagtgggagggtcggtccaatgctcacatcaaaggagattatcaacga
attggagacgttttactgaagaatattcaaggattgaggcagctgacggttcatctgcag
aagcattcggagtgcctggtggagctggagcgagcttgtaggtcgagtcgtaaggtggag
gccgtgtgcagggactttgagcagcagagggtttgctacctgccgctctacatcttcctg
ctgcgcccgctgcaccgcctgctgcactacaagctgatcctggagaggctctgcaagcac
taccctcccacccacgacgacttcagggacagcagagctgccctggcagagatctctgag
acggcgctgcagcttcagggcatcatgatgaagatggagaatttccagaagctgctggag
ctgaggaaggatctgactggcgtggagaacctcgtcacgcctggcagggtgcgtcttcct
ccgcgctgtctcctcctcaggtctgctggactccagctgacgggtcgtgtttgtgtttgt
ggcctgcaggagttcatcaggctgggctgcctcagcaagctgtcagggaaaggtctgcag
cagaggatgttcttcctgttcagtgattgtttgatgtacaccagtcgaggaacgactccg
tccaaccagtttaaggttcatggccagctgccgctgtacggcatgacgatcagagaaagt
gaggaggagtggggggtccctcattcgtttacgctctttggacagcggcagtctgtggtg
gtggcagccagttgtgctgcagagatggagcgctgggtggaggacatcaggatggccatc
gacctggcagaacagagcagcggcccaaacgccgaactgctgtccaccagtccacccgac
accaagcctctggaggacgctggagctgagctggagtcggaagaggagctctgcggctcg
cgctcgtccctcgagcgtcagagtcaccgtggcaacaccaccgttcacgtctgctggcat
cgcaacaccagcgtgtccatggtggacttcagcgtcgccgtggagaaccagctctcaggt
aacctgctgaggaagttcaagaacagcaacggctggcagaaactctgggtggtcttcacc
aacttcagcctctttttctacaagtcgcaccaggatgagtaccctctggccagcctccct
ctcctgggctactccgtcaccgtcccggccgagtccgagaacatccacaaagattacgtc
ttcaagcttcactttaaatcccacgtgtactacttcagatcagagagcgagtacaccttt
gaacggtggatggaggtgatccgcagcgccacctgctccgccagccgccccctgctgagc
tccaggaaggatctgtactga
DBGET
integrated database retrieval system
