Gambusia affinis (western mosquitofish): 122827711
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Entry
122827711 CDS
T07758
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122827711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
gaf04030
]
122827711
G protein-coupled receptors [BR:
gaf04030
]
Rhodopsin family
Vision
Opsin
122827711
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GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srx
TAS2R
Motif
Other DBs
NCBI-GeneID:
122827711
NCBI-ProteinID:
XP_043966605
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All DBs
Position
LG01:30137256..30138841
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AA seq
354 aa
AA seq
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MNGTEGPYFYVPMVNTTGIVRSPYEYPQYYLVSPAAYACLGAYMFFLILVGFPVNFLTLY
VTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTIYTSMHGYFVLGRLGCNLEGYFATLG
GEIGLWSLVVLAVERWLVVCKPISNFRFTENHAIMGLVFTWIMANACAAPPLLGWSRYIP
EGMQCSCGVDYYTRAEGFNNESFVIYMFICHFCIPLVVVFFCYGRLLCAVKEAAAAQQES
ETTQRAEREVTRMVIIMVIGFLVCWTPYASVAWYIFSNQGSEFGPLFMTIPAFFAKSSSI
YNPMIYICMNKQFRHCMITTLCCGKNPFEEEEGASTTASKTEASSVSSSSVSPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcacagagggaccctatttttatgtccctatggttaataccactggtattgtc
cggagtccttatgaatatcctcagtactaccttgtcagcccagcagcctacgcttgtctg
ggtgcctacatgttttttctcattctcgtcggcttccccgtcaactttctcaccctctat
gtcaccatcgaacacaagaagctgcgaacccctctaaactacatcctgctcaaccttgct
gtggctgaccttttcatggtgtttggaggattcaccacaacgatttacacctctatgcat
ggctactttgtcctcgggcgccttggctgcaatctggaaggatactttgctaccctgggc
ggtgaaatcggtctctggtcactggttgttctggctgttgaaaggtggctagttgtctgc
aagcccatcagcaacttccgcttcactgagaatcatgctattatgggtctggtcttcacc
tggatcatggccaatgcctgtgctgccccccctcttctcggctggtctcgttacatccca
gagggcatgcagtgttcatgcggagtcgactactatacccgtgcggagggtttcaacaac
gagtcctttgttatctacatgttcatctgccacttctgcattcctcttgtcgttgtgttc
ttctgctatggccgtctgctctgtgccgtcaaggaggctgctgccgcccagcaggagtct
gagaccacccagagagctgagagggaagtcacccgcatggtcattatcatggtcatcggc
ttcctggtttgctggacaccttatgccagtgtggcctggtacatcttctcaaatcagggt
tctgagtttggacctctctttatgaccatcccagctttctttgccaagtcatcctccatc
tacaacccaatgatctacatctgcatgaacaagcagttccgccactgcatgatcaccacc
ttgtgctgcggaaagaatcccttcgaagaggaggagggagcatccaccactgcctccaaa
accgaggcctcctctgtgtcctccagctccgtgtctcctgcataa
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