Gambusia affinis (western mosquitofish): 122828246
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Entry
122828246 CDS
T07758
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
gaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122828246 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
122828246 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122828246 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122828246 (gtf2h2)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122828246 (gtf2h2)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122828246 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
122828246
NCBI-ProteinID:
XP_043967583
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All DBs
Position
LG03:748219..766021
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AA seq
403 aa
AA seq
DB search
MAYRLGPHSDTMDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILYQSKRKRVTQS
HAQVRLGMMRHLYVVIDCSRSMEDQDLKPNRLTSTLKLMEGFIDEYFDQNPISQVGIITT
KNKRAEKLTELAGNPKKHIAALKKAVDSSCVGEPSLYNSLSLAIQTLKHMPGHTSREILI
ILSSLTTCDPANIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRDTGGSYHVILDESHFK
ELLMLHVTPPPASFSSESSLIRMGFPQHSVASLSDQDVKPSFSMSHLDYSGGPALTLGGY
FCPQCQAKYTELPVECKVCGLTLVSAPHLARSFHHLFPLQAFIEHPADNYHLNRFCQACQ
GQLKDKNVFACPLCCSVFCGECDLFIHESLHCCPCCIHNRTAT
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgtttgggccctcattctgacacgatggatgaagagccagagagagccaag
cgctgggaaggaggttatgaaaggacatgggaggtgcttaaggaagatgagtctggctcc
cttaaagccacagtggaggagatcctgtaccagtccaaaagaaaaagggtgacacaaagc
catgcacaagtgaggctggggatgatgcgccacctatatgttgttattgactgttcacgc
agtatggaggaccaggacttaaaacccaaccgtctcacctctaccctgaagttgatggag
ggattcattgatgaatactttgaccagaatcccatcagccaggttggcattatcaccacc
aaaaacaaaagggctgagaagcttacagaacttgcaggaaatccaaagaagcacattgct
gctctgaagaaagcagttgacagctcatgtgtcggagagccttctctgtacaactctctt
agcctggctatacagaccctcaagcacatgcctggacacaccagcagagaaatcctcatc
atcctcagcagcctgaccacatgtgacccagctaacatctatgagctaatcaagaccctg
aagtctcttaaggtgcgagtgtcagtaattggcctctcagcggaagtccgagtgtgcacg
gttctgaccagagacacaggtggatcctaccatgttatcctagatgagagtcacttcaaa
gagctgctcatgcttcatgtcacacctccgccagcaagcttctcatcggaaagctcttta
atacgaatgggttttcctcagcacagtgtagcctctctgagtgatcaagatgtcaaacca
tcattcagcatgtctcatctggactacagtggcggcccggctctgactctaggaggttac
ttctgtccgcagtgccaagcaaaatacacagagcttcctgtggagtgtaaagtctgtggt
ttgacgctggtgtctgctccacatctggccagatcctttcatcatctgtttcccctccaa
gcttttattgagcatcctgctgacaattatcacctgaataggttctgtcaggcctgtcaa
gggcagctgaaagataaaaatgtcttcgcctgtcctttgtgttgcagtgtgttctgtggg
gagtgtgatctcttcatccatgaatcactgcactgctgtccctgctgcattcacaatcgg
actgctacatga
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