Gambusia affinis (western mosquitofish): 122828253
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Entry
122828253 CDS
T07758
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122828253 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122828253 (hnrnpa1b)
03041 Spliceosome [BR:
gaf03041
]
122828253 (hnrnpa1b)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122828253 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
122828253 (hnrnpa1b)
Spliceosome [BR:
gaf03041
]
Common components
Common spliceosomal components
hnRNP proteins
122828253 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
122828253
NCBI-ProteinID:
XP_043967596
LinkDB
All DBs
Position
LG01:complement(5417235..5424346)
Genome browser
AA seq
351 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMAARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSVGMGMRGGRNSGGRPYDYDRGFNQGGRGRYGDGPNNWNDGGLLTSHQPSSDTG
YGGGPGGPGGYNNGGNRGYNQGYNQGGGGGGGGGYGGNSYDSNGYGNCGGGGGGGGSNYN
NMGHYDPQASNFGPMKNNFGGGGGGGGGGRSFGGYGGGSNNPGGYGRPGRF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagacgtcccacgtgagccggagcagctccgcaagctgttcattggaggcctg
agctttgagacaacagatgagagcctgcgggctcactttgaacaatgggggtcccttaca
gactgtgtggtcatgagagaccccaacagcaagaggtccaggggtttcggctttgttaca
tattcatcagtacaggaagttgatgcggccatggctgcccgtccccacaaagtggacgga
agggttgtggagcctaagcgtgcagtttctagagaggactcaaaccgtccaggtgctcat
gtaacggtcaagaaaatctttgttggaggcatcaaagaagacacagaggagtcacacctt
agggattacttccagcagtttggcaaaattgaggtcattgatatcatgaccgaccgcaac
actggaaagaagaggggttttgcttttgtcacgtttgatgaccatgattcagtggatagg
atcgtcattcagaaatatcacacaatcaactctcacaactgtgaagtgaggaaggccctc
accaagcaggaaatgcagagtgtaggaatgggaatgagaggagggcgtaacagtggtggg
aggccatatgattatgacagaggcttcaaccagggaggcagaggccgatatggagatggt
cctaataactggaacgatggtggccttctaacgagccatcagccatcatctgatacaggt
tacggaggcggtcctggtggtcctggcggctataacaacggcggcaacagaggttataac
cagggctataaccagggtggtggtggaggtggcggcggaggctacggtggaaacagctat
gacagcaatggttatggtaactgtggaggaggtggtggcggcggtgggagcaactacaac
aacatgggccattatgacccccaggcctctaactttggcccaatgaagaacaactttggc
ggtggcggcggcggcggcggtggcggcaggagctttggtggctacggaggtggctctaac
aatcccggtggctatggccgcccaggacgattttaa
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