Gambusia affinis (western mosquitofish): 122829467
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Entry
122829467 CDS
T07758
Name
(RefSeq) uncharacterized protein LOC122829467
Organism
gaf
Gambusia affinis (western mosquitofish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PNMA
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
rve
PNMA_N
zf-H2C2
Retrotrans_gag
rve_3
zf-CCHC
Asp_protease_2
RVP
Motif
Other DBs
NCBI-GeneID:
122829467
NCBI-ProteinID:
XP_043969974
LinkDB
All DBs
Position
LG04:1023697..1032355
Genome browser
AA seq
2006 aa
AA seq
DB search
MSLLENWCTGEGLDASHALVVKQVPVETTVKHIEETLMTIKVLGRVRVRGRMFNPQSQSL
MVLCECSERVNTKTIPLDVPPIEGGELWTLHGPADEENINPEKRQMDPLSQNSSTSTEEA
AAPEMLSSEAMPGNSAESIIRAVGDLLAKTMKPAQESNVFRRLRTYSGISPTPPGEESLE
TWMEQAQLMVDESDCSFREKRKRIVESLKGPALEIAQAVRANDPDASPEEYIEALEKAFG
SPESPEDLYFSFRALRQSSGERLSDFLRRVERKLTKVVQRGGITPNMRDSARVDQLLRGT
TESEIMLLQLRLRERKRNPPPFLTLLNEIREEEFQQAVRKKNVAPSARPFVRQVRVEDEN
NSESEVQELQAQVKMLQSQVSELTTGQLKATSNAQNAFHTDDLKPRKNYEVQALRKQVED
VQHHLNMMTVTHTNPPQTKGARWRPENKANKVNKAPPHLSSQRTTHTNHDEEDFFCYRCG
EGGHVSTHCTAPEDQGKVIQKLIRSLKRQKRNETNKQAKETSNTNCSVKRNAVDAQHATG
IPKGLVGEASLSKVIIEGQPTNALMDSGSSVTIIFESWYTDHLSHLPLHPISSLALWGLS
ESCYPYKGYIAMNVEFLADGFHSEPTTVLALVCPDPKGPDQAPVIMGTNACRFHHQPKSS
DEAEGPGHARAWRVSVSTPKTFKQERPSVQLDDSVGHIKWMGPGPLKVPPGGSALAACKV
IAKESWEQDMLVVEPPEQPSLPDGIMVPPCVLLPSDMNLNNFSLVLKNESIKTKAIPKGT
IVACIHKANVVTELPKSKESGQTIDPGLFDFGDSPIPSAWKERLAHKLSEKAGVFSLEEW
DVGLARGVEHTIRLSDSRPFRERSRRLAPADIDDVRSHLQKLLAAGIIKESRSPYASPIV
VARKKNGSIRMCIDYRTLNARTIPDQYTVPRIDEALDCMTGSRWFSVLDLRNGYYQIGMA
EQDKEKTAFICPLGFFQFERMPQGITGAPATFQRLMEKAVGDMNLLQCLVYLDDLIVFGR
TLEEHEERLLKVLDRLQEYGLKVSINKCQFCQPQVKYVGHIVSASGISTDPEKIKAVLNW
EQPTDLKSLQSFLGFCGYYRRFIANYSSIVRPLTDLTKGYPPVKKGQKAVNSNSVYLKKS
EPFGDRWTLACTTAFKKIIQCLTTAPVLAFADPTKPYILHVDASFDGLGAVLNQEHPEGL
RPVAFASRKLRNSERNYPVHQLEFLALKWAVVDKLHDYLYGAKFTVRTDNNPLTYVLTTA
KLSAAGHRWLAALSTYDFGIQYRPGRENIDADLLSRNANSEEEGWIPPSGVKALCKTVSV
AGFSGNTRCVDQLGVSPSAIPDLYVYPISLGENPVQQFSLTDLQNEQDSDEAIGKIKNEI
KAGHWPCSFQTEHQEAILLQREKEKLQIKNGLMYRRLIRPTGKEVFQLVLPPKHRLQVLK
QLHDDFGHLGIEKTTELVRDRFYWPKMAHDIEHYVKTCGVCVAHKTLPRKTSPLHQITSR
GPLDLVCIDFLSIEPDSRGVANVLVITDHFTRYAQAIPTSNQRATTVAKVLLEKFFVHYG
LPRRIHSDQGRDFESSLIKELLNMLGIKKSRTTPYHPQGDPQPERFNRTLLSMLGTLEPQ
DKQKWSQHVASMVHAYNCTRNEATGYSPYFLMFGREARLPVDVCFGLSQAGEEDIKHHQY
VDKLRKELRHACHLATEASNKNHQKNKRSYDGRVRAQNLEDGDRVLIRALGIPGKHKLKG
KWNPQPYVVVGKLPNLPVYRVKPESGQGVVKTLHRDHLLPIGILVRIPDLTERSCLPQRP
STRSTDVAKAQYEVQHSAEEARDEDSEDDEDVPRQFCRGVVQDAWLTRPPTVQLLSLAND
RSDVISERDLGGPTLSCNEEGGLDHDAVVEEDTGDILSSEDPVADTGLEVGDVPTSSMSD
DEVNSTSVPATKRLVKPVIRLSYDEPGKPTDKPLVIVHRGVRIYITTDPEEDPTIVCHPP
CNVPVHRVASCSFESLLHTEQSDGDI
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgttggaaaattggtgtacaggggagggcttagatgcatcccatgcacttgta
gtaaaacaggtccccgtagagaccacagttaagcacattgaagaaactttgatgactatc
aaagttctaggacgagttagggtgagagggcgtatgtttaaccctcaatcacagtccttg
atggttttatgcgagtgtagtgaaagagtaaacacaaaaactatacctctggatgtgcca
cctattgaaggaggtgaactgtggacattgcatgggcctgcagatgaagaaaacatcaac
cctgaaaagagacaaatggatcctctctcacaaaatagttctacatctactgaagaagca
gctgcaccagaaatgctatcatcagaagctatgccaggaaactcggcagagtcgatcatc
agagctgttggtgatctgctagcaaagacaatgaagcctgcccaagaaagtaatgtcttc
aggcgtctccgaacatattctggcataagtcccacacctccaggagaggagagtttggag
acatggatggagcaagcacagctaatggtggatgagagtgactgttcctttcgagagaaa
aggaaaaggatcgtagaaagcctgaaaggacccgctctggagattgctcaagctgtaaga
gctaatgatccagatgcatccccagaggaatatattgaagctctagaaaaagcatttgga
tcaccagagagtcctgaagatctctacttctccttcagagccttgcgccaaagctcaggt
gaaagactttctgatttcttacggagagtagagcgaaagctaacaaaagtggttcagcga
ggagggataactcccaatatgagagacagtgcacgtgtggaccagctccttcgtggaacc
acagagtccgaaataatgttactacagttacgcctaagagaaagaaagcgtaatcctcct
cccttcctgacactgttgaatgaaatcagagaagaagagtttcaacaagcagtaaggaag
aaaaatgttgctccttctgctagaccatttgtcaggcaagtgagggtggaagatgaaaat
aattcagaatctgaagttcaggagctgcaggctcaagtcaaaatgctgcagtcccaagtg
tctgaactcacaactggtcagttaaaagccacctcgaatgctcaaaatgcattccacaca
gatgacctgaaacccagaaaaaattatgaagttcaggctttaagaaaacaagttgaggat
gtgcaacatcatctcaacatgatgactgtgacacacacaaatcctcctcagactaaaggt
gcaagatggagaccagaaaacaaagcaaataaagtgaataaagctccccctcaccttagt
agccaaagaacaactcacaccaaccatgatgaagaggatttcttctgttacaggtgtggg
gaaggaggacatgtgtctactcattgtacagcccccgaagaccaaggcaaagtcattcag
aaactgatccgttctctaaaaagacaaaaaagaaatgagacaaacaaacaagcaaaagag
acctcaaataccaactgctctgtcaaaaggaatgcagttgatgcccaacatgctacaggc
atccctaagggactagtaggggaggcctccctcagtaaagtaatcattgaaggtcaacca
accaacgccctgatggacagtggttctagtgttaccataatatttgaaagctggtacaca
gaccatttgtcccacttacctcttcatcctatttctagcttggccctctgggggctcagt
gaatcctgctatccatacaagggctatatagctatgaatgttgagttcttggctgatggt
tttcactcagagccaacgacagtgttagccttagtctgccccgaccctaagggtccagat
caggccccagtaatcatgggaaccaatgcctgtcgttttcatcaccagcccaagagttca
gatgaagctgaaggccctggacatgctcgagcttggcgtgtttctgtcagcacaccaaaa
acatttaaacaggaacgcccctcagtccagctggatgatagtgttggacacataaaatgg
atgggtcctggacctcttaaggttccccctggtggctcagccctggcagcctgtaaagtc
attgcaaaagagtcctgggagcaggatatgttggtggttgagcctcctgagcagccctct
ctcccagatggaataatggtgccaccgtgtgtcctcttaccatctgatatgaatctaaac
aacttctcactggtgctaaaaaacgaatccataaaaaccaaagccatccctaaaggcacc
attgtggcatgtattcataaagccaacgttgtgactgagttgcccaaaagcaaagagtca
ggtcaaacaatagatcctggattgtttgattttggcgactctccaatcccaagtgcctgg
aaggagaggctggctcataagctatcagagaaagcaggagtgttctcccttgaggaatgg
gatgttggactggccagaggagtcgagcataccatccgcctcagtgactcacgacctttt
cgagagagatccagacgtcttgcccctgccgatattgatgacgtgcgaagtcatctgcag
aaactgctggcagcaggaataataaaggagtcacgtagtccttatgcttcgcccatcgtg
gtggcaagaaaaaagaatggctccatcaggatgtgtattgattaccgcaccctgaatgcg
cgaacaatccctgatcaatacacagttcctaggattgatgaagctttggattgtatgaca
ggaagccgctggttttctgtattggatcttcgaaatggctattaccagattggcatggct
gagcaagacaaggagaaaacagcctttatctgccccctagggttcttccagtttgagcgt
atgccccaaggcataacaggagccccggctacctttcaaaggttaatggaaaaggctgtc
ggagacatgaacctcctgcaatgtttagtatacctggatgacctaatagtgttcggccgg
acactagaggaacatgaggaacgtctcctcaaagtattggatcgactacaagaatatggt
ctgaaggtgtctattaataagtgtcagttctgtcaacctcaggtcaaatatgtcggccac
attgtgtctgcttcaggaatttctactgatccagaaaaaatcaaagcagtccttaactgg
gagcagcctactgatcttaagagccttcagtcgtttttgggtttctgtggctactacaga
cgattcattgccaactactcgtccattgtgaggcccctgacagacttaaccaaaggctac
cctcctgttaaaaaaggacagaaagcagttaactccaattcggtctaccttaaaaaatct
gaaccctttggggacaggtggactttggcctgtactactgcttttaagaaaataatacag
tgccttacaactgcaccagtcctggcatttgcagatccaactaagccctacatattgcat
gtagatgccagctttgatgggctaggtgctgtgctcaaccaggaacatccagaaggcttg
cgtcctgtagcctttgccagtcgaaagctgagaaactctgagagaaattatccggtccat
caactcgagttccttgcactcaagtgggctgtggttgataagttgcacgactacttgtac
ggagccaagttcactgtgagaaccgacaacaacccactgacctatgtccttactacggcc
aaactaagtgctgcaggtcatagatggttggctgccctgtccacctatgattttggcata
cagtatcgaccaggtcgggagaatattgatgccgacctgctttccagaaatgcaaactct
gaagaggaggggtggatacctccctctggagtgaaagctctgtgcaaaactgtaagtgtg
gctgggttctctggaaacacacggtgtgtggatcaactgggtgtttccccatctgccatt
cctgatctgtatgtgtaccccatctctcttggtgagaacccagtacaacagttcagcctg
acagacctacaaaatgaacaagactcagacgaagctattggaaagattaaaaatgagata
aaagctggacattggccctgtagcttccagactgagcatcaggaggccattctgctacag
cgagagaaagagaagttgcagataaagaatggactgatgtacaggaggcttataaggcct
accggaaaggaagtgttccagttggtgcttcctccaaaacatcggctgcaagtattaaag
cagttgcatgatgattttgggcacctcggtattgaaaaaacaaccgagttggtgcgggat
cggttctattggccgaaaatggcacatgacattgagcattatgtcaagacttgtggggtt
tgtgtggctcacaagaccttgcctcgcaaaacgagtcccctacaccagatcacaagtcga
ggcccattagacttggtctgtatagacttcttgtctatcgagccagattctcgtggggtg
gccaatgtactcgttattaccgatcattttactcggtatgctcaggccatacccactagc
aaccaaagagctactacagttgctaaagttctgctagaaaagttctttgtgcactatggc
ttaccacgccgaatccactctgaccaagggcgtgattttgagagttctctgataaaagag
ctccttaatatgctggggataaagaaatcaagaactacaccctatcatccccaaggggat
ccccagccagagcgctttaatcgcactctcttgtctatgttgggcactctcgagccacag
gacaaacaaaaatggagtcagcatgtggcctctatggttcatgcttataactgtactcgt
aatgaggccacaggatattcaccatacttcctgatgtttgggcgggaggctcgtctgcct
gtggatgtgtgttttgggttgtctcaagctggagaagaagacattaaacatcatcaatat
gtggacaaactgagaaaagagctccgtcatgcttgccatcttgcgacagaggcttccaac
aagaatcatcagaaaaacaagagaagctatgatggcagggttcgagctcagaacctggag
gacggagatcgggttcttattcgagccttgggaatccctggaaaacacaagttaaagggg
aagtggaatccgcaaccttatgtggttgttggaaagctccctaacttacctgtgtatcgg
gtaaaacctgaaagtggacaaggggtagtaaagactctgcacagagatcatctgctacca
atagggattctggtgagaattccagacctcactgaaagaagctgtctgcctcagagacct
tccaccaggtccactgatgtagctaaagcccagtatgaggtgcagcattcagcagaggaa
gcgagggatgaggattctgaagatgatgaagatgtccctcggcagttctgcagaggagtt
gtccaggatgcctggttaacacgccctccaactgtccagttattgtcccttgctaatgac
agatctgatgtcatctctgaaagagatcttggcggaccaactctgtcatgcaatgaggag
ggagggcttgaccacgacgcagttgtagaagaggacacaggtgatatactttcgtcagaa
gaccctgtggcggacacagggctggaggtgggagacgtcccaacatctagtatgtctgat
gatgaagttaactctaccagtgttcctgctactaaacgactggttaagcctgtcatccgt
ctgagctacgacgagcctggaaagcccacagacaagccattggtcattgtgcacagaggg
gtgaggatatacataaccacagatcctgaggaagatcccactattgtctgtcatccgccc
tgcaatgtcccggttcatagagtagcaagctgcagttttgagagtttgttgcatacagaa
cagtctgatggggacatctag
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