Gambusia affinis (western mosquitofish): 122830633
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Entry
122830633 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122830633
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122830633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
zf-RING_6
U-box
Taxilin
zf-RING_10
MRP-S31
AAA_23
zf-C2H2
Exonuc_VII_L
PfkB
Motif
Other DBs
NCBI-GeneID:
122830633
NCBI-ProteinID:
XP_043972080
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Position
LG05:complement(29235156..29237426)
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AA seq
555 aa
AA seq
DB search
MEQLDRETFSCSICLDLLKDPVAIPCGHSYCMNCITNFWDEGEKKKNYHCPQCRKTFTQR
PDLQKNTMLAALVEQLKKTGLQAAPADLHYAGPEDVACDSCTGRKLKAIKSCLFCLASFC
EKHLQPHRDVASYKKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCTVDEHKGH
DTVSAAAERTERQRELEERRGKIQQMIQDQEKNVKLLQQEVEAINHSADKTVEDSEKIFT
ELIRLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDHNQ
FLLHYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVTEV
DVLLSEPEPEPKSRAGFLRYSCEITLDPNTAQTLLFLSEGNKKVTGMNQDQSYSSHPDRF
TDYWQVLSRESLTGRCYWEVEWSGIQVSVAVAYKNISRVGSGNECGFGCNDKSWALECSQ
NNFSFGHNNIWTSVSGPVPSRVGVYLNHRAGILSFYSVSETMTLLHRVQTTFTQPLLAGV
WLYYPGDSAEICEPK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctggaccgagaaaccttctcctgttccatctgtctggatctactgaaggat
ccagtggctattccctgtggacacagctactgtatgaactgtattacaaacttctgggat
gaaggtgagaaaaagaaaaactaccactgtcctcagtgcaggaaaaccttcacacagagg
cctgacctgcagaaaaacaccatgttagcagctttggtggagcagctgaagaagactgga
ctccaagctgctcctgctgatctccactatgctggacctgaagatgtggcctgtgattcc
tgcactggaagaaaactgaaagccatcaagtcctgtttattctgtctggcctctttctgt
gagaaacaccttcaacctcatcgtgatgtggcttcatacaagaaacacaagctggtggag
ccgtccaagaacctccaggagaacatctgctctcgtcatgatgaggtgatgaagatgttc
tgccgcactgatcagaaatgtatctgttatctctgcactgtggatgaacacaaaggccat
gacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggagagacga
ggaaaaatccagcagatgatccaggaccaggagaaaaatgtgaagctgcttcaacaggag
gtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatcttcacc
gagctgatccgtctcctccagaaaagaagctctgaggtgaagcagcagatcagatcccag
caggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggagatcact
gagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcacaaccag
tttctcctccactacccctcactgccagcactcagtgagtcgacacactcatccagcatc
aacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctcagagag
aaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcactgaggtg
gatgttctactgtcagaaccagaaccagaaccaaagagcagagctggattcttaagatat
tcatgtgaaatcacactggatccaaacacagcacaaacactgctcttcctatcagagggg
aacaagaaggtgacaggaatgaatcaggatcaatcttattctagtcacccagacagattt
actgattactggcaggttctgagtagagagagtctgactggacgatgttactgggaggtg
gagtggagcgggatacaagtttctgtagcagtcgcatacaagaacatcagcagagtagga
agtgggaatgaatgtggatttggatgtaatgacaaatcttgggcattagagtgttcccaa
aacaattttagttttggtcacaacaacatctggacctccgtctcaggtccagttccctcc
agagtcggagtgtacctgaatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagccgctgctggctggagtt
tggctttattaccctggagactctgcagagatctgtgaacccaaatag
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