Gambusia affinis (western mosquitofish): 122831712
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Entry
122831712 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122831712
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122831712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-RING_6
U-box
MRP-S31
SMC_N
zf-C2H2
Exonuc_VII_L
PfkB
Motif
Other DBs
NCBI-GeneID:
122831712
NCBI-ProteinID:
XP_043974031
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Position
LG05:28972825..28974855
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AA seq
555 aa
AA seq
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MEQLDRETFSCSICLDLLKDPVAIPCGHSYCMNCITNFWDEGEKKKNYHCPQCRKTFTQR
PDLQKNTMLAALVEQLKKTGLQAAPADLHYAGPEDVACDSCTGRKLKAIKSCLFCLASFC
EKHLQPHRDVASYKKHKLVEPSKNLQENICSCHDEVMKMFCRTDQKCICYLCTVDEHKGH
DTVSAAAERTERQRELEERRGNIQQMIQDQEKNVKLLQQEVEAINHSADKTVEDSEKIFT
ELIRLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDHNQ
FLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVTEV
DVLLSEPEPEPKSRAGFLRYSCEITLDPNTAQTRLLLSEGNKKVTAMNQHESYSSHPDRF
TFWCQVLSRESLTGRCYWEVEWSGKQVYVAVAYKNISRVGDGNECKFGYNDKSWALECSQ
NNFSFGHNNIWTSISGSGSSRVGVYLNHRAGILSFYSVSETMTLLHRVQTTFTQPLLAGV
WVSNTGYSAEICEPK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctggaccgagaaaccttctcctgttccatctgtttggatctactgaaggat
ccagtggctattccctgtggacacagctactgtatgaactgtattacaaacttctgggat
gaaggtgagaaaaagaaaaactaccactgtcctcagtgcaggaaaaccttcacacagaga
cctgacctgcagaaaaacaccatgttagcagctttggtggagcagctgaagaagactgga
ctccaagctgctcctgctgatctccactatgctggacctgaagatgtggcctgtgattcc
tgcactggaagaaaactgaaagccatcaagtcctgtttattctgtctggcctctttttgt
gagaaacaccttcaacctcatcgtgatgtggcttcatacaagaaacacaagctggtggag
ccgtccaagaacctccaggagaacatctgctcttgtcatgacgaggtgatgaagatgttc
tgccgcactgatcagaagtgtatctgttatctctgcactgtggatgaacataaaggccat
gacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggagagacga
ggaaacatccagcagatgatccaggaccaggagaaaaatgtgaagctgcttcaacaggag
gtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatcttcact
gagctgatccgtctcctccagaaaagaagctctgaggtgaagcagcagatcagatcccag
caggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggagatcact
gagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcacaaccag
tttctcctcaactacccctcactgccagcactcagtgagtctacacactcatccagcatc
aacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctcagagag
aaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcactgaggtg
gatgttctactgtcagaaccagaaccagaaccaaagagcagagctggattcttaagatat
tcatgtgaaatcacactggatccaaacacagcacaaacacggctcttactatcagagggg
aacaagaaggtgacagcaatgaatcagcatgaatcttattctagtcacccagacagattt
acattttggtgtcaggttctgagtagagagagtctgactggacgatgttactgggaggtg
gagtggagcgggaaacaagtttatgtagcagtcgcatacaagaacatcagcagagtagga
gatgggaatgaatgtaaatttggatataatgacaaatcttgggcattagagtgttcccaa
aacaattttagttttggtcacaacaacatctggacctccatctcaggttctggttcctcc
agagtcggagtgtacctgaatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagccgctactggctggagtt
tgggttagtaacactggatactctgcagagatctgtgaacccaaatag
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