Gambusia affinis (western mosquitofish): 122837351
Help
Entry
122837351 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122837351
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122837351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
MAP65_ASE1
U-box
Exonuc_VII_L
Gp58
Motif
Other DBs
NCBI-GeneID:
122837351
NCBI-ProteinID:
XP_043983593
LinkDB
All DBs
Position
LG09:2736275..2738654
Genome browser
AA seq
554 aa
AA seq
DB search
MAQTGVQTDRERFSCSICLDLLKDPVTTACGHSYCMNCIKDFWDGEDQKGTYSCPQCRET
FRERPILKKNTLIAELVEDLKKSRAKAAPADHCYAGPGDVACDVCTGRKMKATKSCLVCL
VSYCENHLQPHYDVPVLKKHKLVDPSENLQQSICSRHDEVMKIFCRTDQQCICYLCTMDE
HKGHETVPAAAERDEKQKKLQESRQQIQQRIQDREEDVKLLQQEVEAINVSADNTVEDSE
RIFTELIRLLQTRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKTKDAELEQLSHTE
DHNQFLLNYPSLPELSESTHSSSINVRPVRHFEDVTAAVSELRDKLQDVLRDSWTNVSLT
VIEVDVLLSEPKPKTRTDFFKYSRKITLDPNTASSDLLLSEGNRKATKMNKKQFYFDHPD
RFTAYFQVLSKESLTGRCYWEVEWEGEIEVAVSYKSISRSGDESDFRYCDKSWSLYCGTY
SYTFFHNDDQICVSGPVSSRLGVYLDHTAGILSFYSVSETMTLLHRVQTTFTEPLHTGVG
FYDDGNSAEFIKLT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacaggagttcagacggaccgagaaagattttcttgttccatctgtttggat
ttactgaaggatccagtgactacagcctgtggacacagctactgtatgaactgtattaaa
gacttctgggatggagaggaccagaaaggaacttacagctgccctcaatgtagagagacc
ttcagagagaggcccatcttgaagaaaaacaccctgatagcagagttagtggaggacctg
aagaaaagcagagccaaagctgctccagctgaccactgctatgctggacctggagatgtg
gcctgtgatgtctgcactgggaggaagatgaaagctacaaagtcctgtctggtttgtctg
gtttcttactgtgagaatcatctccaacctcactacgatgttcctgtcttaaagaaacac
aagctggtggatccctcagagaatcttcagcagagcatctgctctcgtcatgatgaggtg
atgaagatcttctgtcgtactgatcagcagtgtatctgttatctctgcactatggatgaa
cataaaggccatgaaacagtcccagctgcagcagaaagagatgagaagcagaagaagctc
caggagagtcgacaacaaatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcaacaggaggtggaggccatcaatgtctctgctgataacacagtggaggacagtgag
aggatctttactgagttgatccgtctcctccagacaagaagctctgaggtgaagcagcaa
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagacgaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagaactcagtgagtctacacac
tcatccagcatcaatgtccgtcctgtgagacactttgaggacgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagactcctggacaaacgtctcactgacg
gtcattgaggtggatgttctactgtcagaaccaaaaccaaagaccagaactgacttcttc
aaatattccaggaaaatcactctggatccaaacacagcatccagtgatctgttattatct
gagggaaacaggaaagcaacaaaaatgaataaaaagcagttttattttgatcatccagac
agattcactgcatactttcaggttctgagtaaagaaagtctgactggacgttgttactgg
gaggtggagtgggaaggagaaattgaagtagcagtttcatacaagagtatcagcagatca
ggagatgaaagtgattttcgatactgcgacaagtcttggtcattgtattgtggcacatat
agttatacattttttcataatgatgatcaaatctgtgtgtcaggtccagtttcctccaga
ctaggagtgtacctggatcacacagcaggtattctgtctttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactgagccgctacatactggagttggg
ttttatgacgatggaaactcagctgagttcattaagctgacataa
DBGET
integrated database retrieval system
