Gambusia affinis (western mosquitofish): 122838666
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Entry
122838666 CDS
T07758
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122838666 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122838666 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122838666 (usp13)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122838666 (usp13)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122838666 (usp13)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122838666 (usp13)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122838666 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
122838666
NCBI-ProteinID:
XP_043985406
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Position
LG10:complement(15771703..15803404)
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AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPKTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKVKTTGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETSYPLAVK
LDTITPDGADVYSFEEEEAVLDPHLSEHLSHFGIDMLQMQRRTENGHHTDNNPRPRVSEW
EVIQESGMKLKTVFGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMLKALV
SRGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDSFRFLVEERIQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAHEAKRKEAEENTRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFSSFPEYLVVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMSSTDSPEIDEGAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPLPSTSDSPMGATPLDNLPPEESI
AILTSMGFPRNHSIRALKATNNNLERALDWIFTHPEEEESDGLSDMADTEPNDNAFSDMN
SHSDSTLSPDRETSGPRVKDGPGRYEVFAIISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtccccttcatgcccaccatcagagtccccaaa
acaggagacagagtctacaagagcgagtgcgccttctccttcgactcccccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgttaaagtgaaa
accacaggtgctgctggtggtgccatccccagacgaagaaatggaaaagtgtttctggat
ttagagctaaaccgagattttaacggagaggactatgagtatgaggatgaggcaaagctc
gtcatttttccagaccacttcgagatccctttaccaaatattgaggagctgcccgctctg
gtgaccatagcctgtgatgcagtacttaatgcaccttcagcttacaagaaacaggagcct
gagtcttgggaggaagagatccaggtgtcaagacatgccagaagcctcagacagctggat
aatggagtccggatcccacccagtggctggaagtgtcagaagtgcgagatgagagagaac
ctgtggctgaacctgactgatggttcggttctgtgtgggaagtggttctttgatgggagt
gggggcaacggacacgctctggagcactacagagagaccagctacccactagctgttaaa
ctggacaccatcactccagacggagcagatgtttattcgtttgaggaggaagaggctgtt
ttggacccccacctgtcagagcacttatcacactttgggatagacatgctccaaatgcag
aggagaacagaaaatggacaccacacagacaataacccccgaccgcgagtcagtgagtgg
gaagtgatccaagagtcgggcatgaagctgaagacggtgtttggttcaggttacactggc
atcaaaaacttgggaaacagctgctacctcagcacagtgcttcaggtcctgttcagcatc
ccagatttccagaggatgtatgtaggtaaccttcagaggatatttgactattcacccctg
gaccccacccaggatttcgccacacagatggctaaactgggacatgggctcctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaacgggcaccaacagaggggaatctctccccgaatgctcaaggcactggtc
agcaggggccacccagagttttcctccaacagacaacaagatgcccatgagttcttcctg
caccttatcaacttggtggaaaggaacagtgctggctcagagaatccaagcgactcgttt
cgtttcttggtggaggagagaattcagtgctgtcagactcggcgggttcgttacactcag
cgggtcgactactgcatccagctaccggctcccatagaagcagcgacaaatagagaggag
ttgcttgcacatgaggccaagcggaaagaagccgaggagaacacgcgggctcctcctgaa
ccggtgcgagcgcggatccctttcacagcctgccttcaggcctttacagagcctgaaaac
gtccccgatttctggagttcagcgttgcaggccaaatcagctggagtcaaaacttcccgc
ttctcctcgttcccagagtatcttgttgtgcagatcaagaaattcaccttcggtgttgac
tgggtgccaaagaagcttgacctggccatcgatgttccagacttcttggacctgagccgg
ctccgagccacagggctgcaggcgggcgaagaggagctgccggatctcatgcctcccatt
gttttaccggaagacaccagagataactccatgagctcaactgactctccagagatagat
gaaggcgccgttatgcagctggcagagatgggttttccactggaggcctgcaggaaggcg
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgaacctctcactttgccctcaatgatggatcctcttccctct
accagtgacagccccatgggggcgacgccactggacaacttgcctcccgaggagagcatc
gccatcctcacctcgatgggctttcctcgcaatcacagcatccgcgctctcaaagccacg
aataataatcttgagcgagcgctcgactggatcttcacccacccagaggaggaggagagc
gacgggctctctgacatggcggacacggagcccaacgacaacgccttttctgacatgaac
tcacacagcgactccacgttgtccccagacagagaaacgtcaggcccgagagtcaaagat
ggaccaggacgatatgaggtgtttgccatcatcagccacatgggagcctccacaatgtct
ggacattatgtttgtcacatcaaaaaagagggaaggtgggtgatctacaatgaccacaaa
gtgtgtttgtcagaaaggcctccaaaggacttgggctacatctacttttaccgtcgcctc
tcgagcagttaa
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