Gambusia affinis (western mosquitofish): 122841689
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Entry
122841689 CDS
T07758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122841689
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122841689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
zf-RING_11
Fib_alpha
Exonuc_VII_L
FYDLN_acid
MRP-S31
Gp58
Motif
Other DBs
NCBI-GeneID:
122841689
NCBI-ProteinID:
XP_043991165
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All DBs
Position
LG12:26833356..26835196
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AA seq
550 aa
AA seq
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MEQNQPDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEGEQKKNYHCPQCRERFT
PRPVLKKSTMLAALVEQLKKTGLQAAPADHRYAGPEDVACDFCTGRKLKAIKSCLFCLAS
YCEKHLQPHYDVAPLKKHKLVEPSKNLQENICSKHGKVIDIFCRTDQKCICYLCSVDEHK
GHNTVSARAGRTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSEKI
FTELIRLLQKRSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDH
NQFLFRLLSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVT
QVDVLLSEPTTRAGFLKYSCEITLDPNTAETMLVLSEGNRKVTWMNQHQSYSSHPDRFTV
WRQVLSRESLTGRCYWEVERSGRVFVAVAYKNISRSGGGNESEFGGNDKSWALDCYSNGY
QFGHNNNWTSVSGPVSSRVGVFLDHEAGILSFYSVSKSMTLIYRVQTRFTQPLHAGVWVW
SGSAEFCKPK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaatcagccggaccgagaaactttctcctgttcgatctgcctggatctactg
aaggatccggtgacgattccctgtggacacagttactgtatgaactgtattaaaagtttc
tgggatgaaggtgagcagaagaagaactatcactgtcctcaatgcagagagagattcaca
ccgaggcctgttttaaagaagagcaccatgctagcagctctagtggagcagctgaagaag
actggactccaagctgctcctgctgatcaccgctatgctggacctgaagatgtggcctgt
gatttctgtactggaagaaaactgaaagccatcaagtcctgtttattctgtctggcctct
tactgtgagaaacaccttcagcctcattatgatgtggctcctttaaagaaacacaagctg
gtggagccgtccaagaacctccaggagaacatctgctctaagcatggtaaagtgattgat
atcttctgccgcactgatcagaagtgtatctgttatctctgctctgtggatgaacataaa
ggccacaacacagtgtcagctagagcaggaaggactgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatc
ttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
aaccagtttctcttccgcctcctctcactgccagcactcagtgagtctacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctc
agagagaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcact
caggtggatgttctactgtcagaaccaacgacaagggctggattcttaaaatattcatgt
gaaatcactctggatccaaacacagcagaaacaatgctggtcctatcagaggggaacagg
aaggtgacttggatgaatcaacatcagtcttattctagtcacccagacagattcactgtt
tggcgccaggttttgagcagagagagtctgactggacgttgttactgggaggtggagagg
agcgggagagtttttgtagcagttgcatacaagaatatcagcagatcaggaggtgggaat
gaaagtgaatttggaggtaatgacaaatcttgggctttagattgttactcaaatggttat
caatttggtcacaacaacaactggacctccgtctcaggtccagtttcctccagagtggga
gtgttcctggatcatgaagcaggtattctgtccttctacagcgtctctaaatccatgact
ctgatctacagagtccagaccagattcactcagccgctacatgctggagtttgggtttgg
tcgggttctgcagagttctgtaaacccaaataa
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