Gambusia affinis (western mosquitofish): 122843987
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Entry
122843987 CDS
T07758
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
gaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122843987 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
122843987 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122843987 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122843987 (gtf2h4)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122843987 (gtf2h4)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122843987 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122843987
NCBI-ProteinID:
XP_043995114
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All DBs
Position
LG14:27040346..27058656
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AA seq
465 aa
AA seq
DB search
MMKLRVQLQCKNLHEYLRELNPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPL
PQAAVALWVQKNSQRDHDDCVAVLTGLRLWHSQHLQGGLQGYILNPVFKDNLGTALLGGG
AQWADEGSSLGPDRHARDIESLDRYAMERWEVILQFMVGSPSAVSRDLSELLIQAGLMRS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSDSPSSTNTAS
IPGTKDAGFIVVETNYRLYAYTDSELQIALVALFSEMLYRFPNVVVAQLTRESVQQAIAN
GITAQQIIHFLRTRAHPVLLTQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQAD
FEVLRDRAQGLGCLVWQDVAHRVMVVTSQGHSEVKRFWKRQRSHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcgggtccagctgcagtgtaagaatctccatgaatacttaagagaactg
aatcctgagatactggacagactgtataaccacccagcaacatgtctggctgtctacagg
gaacttccctcactagctaagaactatgtgatgcgcatgttgttcctggatcagcctctc
ccccaggcagctgtggcactttgggtacaaaaaaatagtcagagggatcatgatgactgt
gtcgcagtgctgaccggtcttcgcctttggcacagtcagcaccttcaaggtgggcttcaa
ggatacattttaaatccagtgttcaaagacaacctgggaacagcattgcttggaggaggt
gcacagtgggccgacgaggggagcagcctggggcctgaccgccatgcacgcgacattgag
agcctggaccgctacgctatggaacgctgggaagtgatcctgcagttcatggtgggttca
cctagtgctgttagtcgagacctgtctgagctactgattcaagccggcctcatgagaagt
gaggctggggaagcaccgtacatcacttccgctggttttcagttcctccttctggacaca
gcctctcagctttggtacttcactttgcagtacctgaaaactgctcagtctagagggatg
gacctcgtggagatcttatccttcttgttccagctcagtttttctactttggggagagat
tactcagtggaggggatgagcgagtctttgctaactttcctgcagcatcttcgggagttt
ggactggtgtttcagaggaagaggaagtcccggcggtactatcccaccagactggcaatt
actttggctgctggagtaactaccagctccgactctccctcctccaccaacactgcttcc
attcctggaactaaagatgctggcttcattgttgtggaaaccaattatcgtctctacgcc
tacacagattcagagcttcagattgctctggtggctcttttcagtgaaatgttgtatcgt
tttcccaacgtggtggtcgctcagcttacaagagaatccgttcagcaggccattgctaat
ggaattaccgctcagcagatcatccactttctaaggaccagagctcaccctgtcctgctc
acacagaccccagtgctgcctccaactataacagaccagatcagactgtgggagctcgag
agagatcggctgcaattcacagagggagtactctacaatcagttcctgtcccaagcagac
tttgaggtgctgcgagacagagctcagggcttgggctgtctggtgtggcaggatgtggct
cacagggtgatggtggtgacatcccaaggacacagcgaggtcaagaggttctggaaacga
cagaggtctcacatatag
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