Gambusia affinis (western mosquitofish): 122843998
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Entry
122843998 CDS
T07758
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gaf03012
]
122843998 (abcf1)
Translation factors [BR:
gaf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122843998 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_18
ABC_tran_Xtn
AAA_14
AAA
AAA_28
NACHT
AAA_22
AAA_24
AAA_16
AAA_5
MMR_HSR1
RsgA_GTPase
cobW
NB-ARC
ATP-synt_ab
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
122843998
NCBI-ProteinID:
XP_043995131
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Position
LG14:27144383..27168764
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AA seq
787 aa
AA seq
DB search
MPKKAKEETEWVDTDVAPGAEKTVKKGKKDKKGKKSFFEELSTESKPEKVDEAAGKDNQT
KQPQKKKERRKGKGVDVGEKDDEDVMLTLKNLSVQGSDEEVEPGITASKGNKKTTGNIFA
ALSQSDDEPDLDEDDDKPVVKKGKTKAAEQQRNIADNKDDDEEDDEGSDSMMQSAEDVIA
QQAKEAADDPFANLSKKEKKKKKKQMEYERQVASVRAQNALEGDFSVSQAELSSRQAMLE
NASDIKLEKFSISAHGKELFVNADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPN
IDVLLCEQEVIADDTPAVQAVLKADTRRLKLLEEEKMLQARLEKGEDSVAQRLEKVYEEL
RVIGAAAAEAKARRILAGLSFTPEMQNRATKRFSGGWRMRVSLARALFMEPTLLMLDEPT
NHLDLNAVIWLNNYLQSWKKTLLIVSHDQSFLDDVCTDIIHLDNQKLYYYRGNYLTFKKM
YVQKQKELQKQYDKQEKKLKELKAGGKSTKQAEKQTKDALTRKQQKGKKKGPQEEESLEA
PELLKRPKEYTVKFTFPNPPPLSPPILGLHSVDFGYEGQKPLFKNVDFGIDMDSRICIVG
PNGVGKSTLLLLLTGKLNPIKGEMRKNHRLKVGFFNQQYADQLNMEETATEYLMRNFNLP
YQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFSELACRQPDVLILDEPTNNLDIESI
DALSEAINEYKGAVIIVSHDARLITETQCQLWVVEDCTVNQIEGDFDDYKREVLEALGET
MVNKVNP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaaagcgaaagaagaaacagaatgggtcgacactgatgtcgctccaggggca
gaaaaaacagttaaaaaaggaaagaaagacaaaaaggggaaaaagagtttttttgaagag
ctctcaactgaaagcaaacctgaaaaggtcgatgaggctgctgggaaagacaatcaaaca
aaacagccccagaaaaaaaaagaacgacggaaaggaaagggagtggatgtgggtgagaaa
gatgatgaggatgtcatgctgaccttgaaaaatctctcagtgcaaggaagtgatgaggaa
gttgaaccaggcatcacagccagcaaaggaaacaagaaaacgactggaaacatctttgct
gctctgagccagagtgatgatgaaccagatctggatgaagatgatgataaacctgtagtg
aagaaaggaaaaacaaaagcagctgagcaacaacggaacatagctgataataaggatgac
gatgaggaagatgatgaaggaagtgacagtatgatgcagagcgctgaggatgtcattgca
caacaggccaaggaggcagcagatgacccgtttgctaacctgagtaaaaaggagaagaag
aaaaaaaaaaaacagatggaatatgagcgtcaggtggcaagtgtccgagctcaaaacgcg
ttggaaggagatttctccgtatctcaggctgaactgtcctccaggcaggcgatgctggag
aatgcctcagatattaagctggagaagttcagcatatctgctcatggcaaggagcttttt
gtcaatgctgaccttctgattgtggcaggaagaagatatggtttagttggaccaaatggc
aaaggaaagaccaccttactaaaacacatagcaaacagagctctcagtatcccccccaac
attgacgtgttgctgtgtgaacaggaggtgatagctgatgacaccccggcagtgcaagct
gtgctgaaagctgacactcgccgcctgaagctccttgaggaggagaagatgctccaggct
cgtctggagaagggagaggacagcgtggcccagaggctggagaaggtgtatgaagagctg
agggtgattggagctgcagcagcggaggccaaggccaggcggatcctggctggtctgtca
tttacccctgagatgcagaacagagccaccaagcgtttctcaggaggatggaggatgaga
gtttcccttgctagagccctgttcatggagcctaccctgctgatgctggatgagcccacc
aaccacctggacctgaacgctgtcatctggctgaacaactaccttcaaagctggaagaag
actctcctcatagtgtcccatgaccagagttttctcgacgatgtgtgtactgatattatc
cacctagacaaccaaaaactctactattatagaggaaactatttgaccttcaagaaaatg
tacgtgcagaagcagaaggagctgcagaagcagtatgacaaacaggagaagaaactcaaa
gagctgaaggctggaggcaagtccaccaagcaggctgagaagcagactaaggacgccctg
acaaggaagcagcaaaagggcaaaaagaagggacctcaggaggaggagagcctggaggcc
ccagagctgctcaagaggccaaaggagtacactgtgaagttcaccttcccaaaccctcct
ccactctctccacccatcctgggcctgcacagtgttgactttggctatgagggtcagaag
cctctcttcaaaaacgtggactttggcattgacatggactccaggatctgcattgtgggg
cccaatggtgttgggaagagtactctgctgctgctgctcacaggaaaattaaatcctatt
aagggtgaaatgagaaagaatcaccgcttgaaagtgggcttctttaatcagcagtatgct
gatcaactgaacatggaagagacggcaacagagtatcttatgagaaacttcaacctgccc
taccaggatagcagaaagtgcttgggacgctttggccttgaaagtcatgcacacaccatt
cagatctccaaactctctggcggccagaaagccagagttgtgttttcagagttggcttgt
cgtcagccagatgtgcttatcttggatgaacctactaataatttggacattgagtcaata
gacgccttgtcagaggccatcaatgaatacaaaggagctgtgatcattgtgagccatgac
gcgcgactcatcacggagactcagtgccagctgtgggtggtggaggactgcaccgtcaac
cagatcgagggagactttgacgactacaagagggaagtgttggaggcccttggagaaacc
atggtcaataaggtcaatccatga
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