Gambusia affinis (western mosquitofish): 122844964
Help
Entry
122844964 CDS
T07758
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82
KO
K12006
tripartite motif-containing protein 16
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122844964 (ftr82)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122844964 (ftr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Prok-RING_4
PI3K_P85_iSH2
zf-RING_10
DivIVA
LMBR1
Motif
Other DBs
NCBI-GeneID:
122844964
NCBI-ProteinID:
XP_043996811
LinkDB
All DBs
Position
LG15:17501689..17518392
Genome browser
AA seq
577 aa
AA seq
DB search
MADHTSPDYFSCSLCQSLLRDPVAIPCGHSFCMDCIDGYWNEADYTGIYICPQCKITFTQ
RPVLRPNATLTMVAEKIKKSGLNVNLSASQANVYAGTNDVPCDFCTGKKLKAVKSCLNCL
ASYCEKHLRPHYESATFKRHKLVDELGNLDRKVCLQHQKSLELFCRTDQMCICAICTVSE
HRGHDIVSADAERGEKQKLLGVSQAEIKQKCQERVKELEELKTAVDSLKNSAQRAMVESQ
KMFEDMIRSIERMRSEVTKLIGINEKAAFNQAEALIERLEQEIDELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPKVTINPDFSFASVRKAVAVIKERLEEFGREELLKISKT
VNEVPVYTTESRTLDRRSRGKEMKMTVDNTPPPEPKTRADFIKYFCQLKLDPITAYKELY
ISDGSRKVIRTRDLQPYSDSPERFDSFAQVLCREALSGGRFYWEIEWSGEFSIGVAYRSI
SRKGKGSLCLLGYNDKSWSLLCSDTGYSAWHNRVDKAVNGPHSPRIGVYLDHTAGVLAFY
SIGSSSMTLLHRFHATFVEPVYPGFGVGTSVKICNVK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccacacgtctcctgattatttcagctgctccctgtgtcagagtctcctcagg
gaccccgtggccatcccctgtggccacagcttttgcatggactgcatcgacggctactgg
aacgaagcggactacaccgggatctacatctgtccccagtgcaagatcacgttcacccag
aggcccgtgctgcgacccaatgccaccctcaccatggtggccgagaagatcaagaagagc
ggcctgaacgtcaacttgagcgcgtcgcaagcgaatgtctacgcggggaccaacgacgtg
ccctgtgacttctgcacagggaagaaactcaaggcagtcaagtcgtgcctgaattgcctg
gcgtcgtactgcgagaagcacctgagaccgcactacgagtcggccacgttcaagaggcac
aagctggtggacgagctggggaacctagacaggaaggtctgcctgcaacaccagaagtcc
ctggagctcttctgccggacggaccagatgtgcatctgtgccatctgcaccgtcagcgaa
cacagagggcacgacatcgtgtccgccgatgcagagaggggcgagaagcagaaactgttg
ggtgtttcccaagctgagattaagcaaaaatgccaggaaagggtaaaggagctggaggaa
ctcaagactgctgtggattcacttaagaactcagcccagagagcaatggtggagagccag
aagatgtttgaggacatgattcggtccatcgagaggatgaggtcggaggtgaccaagctg
atcggcatcaacgagaaggcggctttcaaccaggccgaagctttgatcgagcgactggag
caggagatcgacgagctcaagaagaaggagaccggcctcaagcagctctacagcaccgaa
gaccacatccattttctgcagaacttcaactacctgtgcacgccgaccgatgatggcttc
atccccaaggtgaccatcaaccccgacttctcctttgcctccgtcaggaaggctgtggcg
gtgataaaagagcgcctcgaggaattcggcagggaggagctgctcaaaatttccaaaaca
gtgaatgaggtcccagtctacacgacggagagccggacattggacagaagaagcagaggt
aaagaaatgaaaatgacagtggacaatactcctcctccagagccaaagaccagagccgat
tttatcaaatacttctgccagctgaagctggaccccatcaccgcctacaaagagctttac
atctccgacggcagcagaaaggtcatccgcaccagagacctgcagccctacagcgacagc
cctgagaggttcgacagcttcgcccaggtgctgtgccgcgaggccctgtccggcggtcgc
ttctattgggaaatcgagtggagcggggagttctccatcggcgtggcctacaggagcatc
agccggaagggcaagggctcgctgtgcctgctgggatacaacgacaagtcctggagtctc
ctctgctccgacacgggatactccgcctggcacaaccgggtggacaaagccgtcaacggg
ccgcactcacccaggataggtgtgtacctggaccacacggcgggggtgctggcgttttac
agcataggcagcagctccatgacgctcctgcacaggtttcatgccacatttgtcgagccg
gtctatccgggcttcggagtcggaacgtctgtgaagatctgcaacgtcaagtga
DBGET
integrated database retrieval system