KEGG   Gambusia affinis (western mosquitofish): 122844964
Entry
122844964         CDS       T07758                                 
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82
  KO
K12006  tripartite motif-containing protein 16
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122844964 (ftr82)
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122844964 (ftr82)
SSDB
Motif
Pfam: PRY zf-C3HC4_4 SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 U-box zf-RING_5 zf-RING_6 Prok-RING_4 PI3K_P85_iSH2 zf-RING_10 DivIVA LMBR1
Other DBs
NCBI-GeneID: 122844964
NCBI-ProteinID: XP_043996811
LinkDB
Position
LG15:17501689..17518392
AA seq 577 aa
MADHTSPDYFSCSLCQSLLRDPVAIPCGHSFCMDCIDGYWNEADYTGIYICPQCKITFTQ
RPVLRPNATLTMVAEKIKKSGLNVNLSASQANVYAGTNDVPCDFCTGKKLKAVKSCLNCL
ASYCEKHLRPHYESATFKRHKLVDELGNLDRKVCLQHQKSLELFCRTDQMCICAICTVSE
HRGHDIVSADAERGEKQKLLGVSQAEIKQKCQERVKELEELKTAVDSLKNSAQRAMVESQ
KMFEDMIRSIERMRSEVTKLIGINEKAAFNQAEALIERLEQEIDELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPKVTINPDFSFASVRKAVAVIKERLEEFGREELLKISKT
VNEVPVYTTESRTLDRRSRGKEMKMTVDNTPPPEPKTRADFIKYFCQLKLDPITAYKELY
ISDGSRKVIRTRDLQPYSDSPERFDSFAQVLCREALSGGRFYWEIEWSGEFSIGVAYRSI
SRKGKGSLCLLGYNDKSWSLLCSDTGYSAWHNRVDKAVNGPHSPRIGVYLDHTAGVLAFY
SIGSSSMTLLHRFHATFVEPVYPGFGVGTSVKICNVK
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggccgaccacacgtctcctgattatttcagctgctccctgtgtcagagtctcctcagg
gaccccgtggccatcccctgtggccacagcttttgcatggactgcatcgacggctactgg
aacgaagcggactacaccgggatctacatctgtccccagtgcaagatcacgttcacccag
aggcccgtgctgcgacccaatgccaccctcaccatggtggccgagaagatcaagaagagc
ggcctgaacgtcaacttgagcgcgtcgcaagcgaatgtctacgcggggaccaacgacgtg
ccctgtgacttctgcacagggaagaaactcaaggcagtcaagtcgtgcctgaattgcctg
gcgtcgtactgcgagaagcacctgagaccgcactacgagtcggccacgttcaagaggcac
aagctggtggacgagctggggaacctagacaggaaggtctgcctgcaacaccagaagtcc
ctggagctcttctgccggacggaccagatgtgcatctgtgccatctgcaccgtcagcgaa
cacagagggcacgacatcgtgtccgccgatgcagagaggggcgagaagcagaaactgttg
ggtgtttcccaagctgagattaagcaaaaatgccaggaaagggtaaaggagctggaggaa
ctcaagactgctgtggattcacttaagaactcagcccagagagcaatggtggagagccag
aagatgtttgaggacatgattcggtccatcgagaggatgaggtcggaggtgaccaagctg
atcggcatcaacgagaaggcggctttcaaccaggccgaagctttgatcgagcgactggag
caggagatcgacgagctcaagaagaaggagaccggcctcaagcagctctacagcaccgaa
gaccacatccattttctgcagaacttcaactacctgtgcacgccgaccgatgatggcttc
atccccaaggtgaccatcaaccccgacttctcctttgcctccgtcaggaaggctgtggcg
gtgataaaagagcgcctcgaggaattcggcagggaggagctgctcaaaatttccaaaaca
gtgaatgaggtcccagtctacacgacggagagccggacattggacagaagaagcagaggt
aaagaaatgaaaatgacagtggacaatactcctcctccagagccaaagaccagagccgat
tttatcaaatacttctgccagctgaagctggaccccatcaccgcctacaaagagctttac
atctccgacggcagcagaaaggtcatccgcaccagagacctgcagccctacagcgacagc
cctgagaggttcgacagcttcgcccaggtgctgtgccgcgaggccctgtccggcggtcgc
ttctattgggaaatcgagtggagcggggagttctccatcggcgtggcctacaggagcatc
agccggaagggcaagggctcgctgtgcctgctgggatacaacgacaagtcctggagtctc
ctctgctccgacacgggatactccgcctggcacaaccgggtggacaaagccgtcaacggg
ccgcactcacccaggataggtgtgtacctggaccacacggcgggggtgctggcgttttac
agcataggcagcagctccatgacgctcctgcacaggtttcatgccacatttgtcgagccg
gtctatccgggcttcggagtcggaacgtctgtgaagatctgcaacgtcaagtga

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