Glaciecola sp. 4H-3-7+YE-5: Glaag_3019
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Entry
Glaag_3019 CDS
T01483
Name
(GenBank) alpha amylase catalytic region
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF5696
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AEE23953
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Position
complement(3518340..3520121)
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AA seq
593 aa
AA seq
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MILLRALLLISLSGVILGCDTAQNQEKQHTAQSTSTVTDADAANNTLPNDNYLLRDVRDD
VFYFVMPDRFNNADLSNDRGDKNGGISAGGFDATSNRGFHGGDMKGIEQKLEYLQGMGIT
AIWMTPILRNKAVQRDGVAHHGYWIVDFTEIDPHFGSNDDLKSLIAAAHKKGIKVFFDII
TNHTADVVKYEECHHANGDFKGDNHCVYKSIEQQAKGDDYTPFVTLNEQTVKVPAWLNDP
QYYHNQGDTTFEGESSLNGDFNGLDDLDTENPKVLQGMIEIYKNLIKEFKPDGFRIDTVR
HVRLPFWQTFSPSIMTYAQEQGIPNFHIFGEVYDPDPAQLSRFTTEGKLPSVLDFGFQQA
AADVFYRKQSPLAIKALFAQDDLYTDEDSQADLLMTFLGNHDMGRTGYFIEQGVPNASNA
EKLNRSILSHAFMYLSRGIPVVYYGDEQGFTGDGNDVNARQDMFASLVVSDNDNPLLGSN
ASTADDNFDSTHPIYLALKELAQLRHDHHALRRGQYKSRYFNEDSMMFAFARTLPQGKEY
LAVFNAGTEAASMTLPAQSKDYEGLVEATEFNLSDEQITVTVPALSFALYQAK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatattgcttagagcattattacttatttctcttagtggcgtaattttaggttgtgat
acagctcaaaatcaggaaaagcaacacacggcacaaagcaccagcactgtcacggacgct
gatgcagcgaataacacactaccaaacgataactatttattgcgtgatgttcgcgacgac
gttttttatttcgtgatgccggataggtttaataacgccgacctgagcaatgatcgtggt
gataaaaacggtggtatatctgccggcggcttcgatgcaacatcaaaccgaggctttcac
ggtggtgatatgaagggtatcgagcagaaacttgaatatctgcaaggtatggggatcact
gccatttggatgacaccaatattgcgcaataaagcggttcaacgtgatggcgttgcacat
catggttattggatcgtagatttcacagaaattgacccgcattttggctcaaacgatgac
cttaaaagcttaatagcagcagcgcacaaaaaaggcattaaagtctttttcgatatcatt
accaatcacaccgcagacgtggtgaagtatgaagagtgtcatcatgctaatggggatttc
aagggggataaccactgcgtatataagtctatagagcaacaagctaagggagacgattat
accccttttgtaacgcttaacgagcaaacggtaaaagtacccgcttggttgaatgatcct
cagtattaccataaccaaggagataccacattcgagggtgagagctctcttaacggtgat
ttcaatggtctcgatgatttagatacagaaaaccctaaagtattgcagggcatgattgaa
atctacaaaaatttgatcaaagaatttaaacctgacggttttagaattgatacagtgcgc
cacgttcgtttgccattttggcaaacttttagcccatcgataatgacttatgcacaggag
cagggcatacctaattttcatattttcggtgaagtctatgacccagacccagcacaacta
agccgctttactaccgaaggtaaattgccatcagtgttggacttcggctttcagcaagct
gcggcagatgtcttctatcgcaaacaaagtcctctggctatcaaagccttatttgctcaa
gacgatttatatacagatgaagatagtcaggccgatttgctgatgacttttttgggtaat
cacgatatgggccgcacaggttatttcattgaacaaggggtaccaaatgctagcaacgcg
gaaaaactgaatcgcagtattttgtctcacgcgtttatgtacttatctcgcggtattccg
gttgtgtattacggtgacgaacaaggttttaccggtgacggtaacgacgtaaacgctaga
caggatatgtttgcgtctctggtggtcagtgataacgacaatccattactaggcagtaac
gcgagtactgcagacgataattttgacagtactcatcccatctatttggcgttgaaggaa
ttagcgcaattacgacatgatcatcacgctttgcgcaggggccagtacaaaagccgttac
tttaatgaggattcgatgatgtttgcgtttgcgcgaactttgcctcaaggcaaagagtat
ttggcggtgtttaatgccggaactgaagccgccagcatgacgttaccagcgcaatcaaaa
gattatgaagggcttgttgaagcgactgagtttaaccttagcgatgagcagataacagta
acggtaccggcactgagttttgctttgtatcaagccaaataa
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