Geoglobus ahangari: GAH_01104
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Entry
GAH_01104 CDS
T03939
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gah
Geoglobus ahangari
Pathway
gah03410
Base excision repair
gah03430
Mismatch repair
gah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GAH_01104
03430 Mismatch repair
GAH_01104
03440 Homologous recombination
GAH_01104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gah03400
]
GAH_01104
DNA repair and recombination proteins [BR:
gah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GAH_01104
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GAH_01104
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GAH_01104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKG91580
UniProt:
A0A0F7IG62
LinkDB
All DBs
Position
complement(924048..925355)
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AA seq
435 aa
AA seq
DB search
MFEMLRVEAKRAVRILEKHEFARVYTHYDVDGISSGAIIATALLRRGIQFHLSFLSGLND
GVEVEDELVIFADMGSGYPDVISSIDANVIVVDHHFPVGRIEARREFAHINPHLAGIDGS
YELSASGTAFIFANEVGDNSDLSSLALLGMIGDKQKISGGNAEIVKKGVESGHIDEKEGL
RMISGSVRDVLRLSLEPYLDFYSKEEELEEFLERVRINGDREFDELSREEERRLANAIVL
RVLNMNSYPGVVEDFTGKKFFLKSELVRNAVMMSEIVNATGRKASQSIGFGICMRDESYL
EKGHELWRKFTVEIHEEIERRRHEVKEGECIRYLIMEEGSSTGPIASVFSRYLFADRPFV
AINIKKDGRVKVSARSNQKLAERVDLAEVMRIAAEKVGGRGGGHVVAAGANISADVVDEF
VKEVDRLCCTQLGWR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatgctcagagtggaggcaaagagagcagtcaggattctcgagaagcacgag
tttgcccgggtttacacgcactacgacgttgacggaatctcatccggagcgataatcgcc
accgctctcctcagaaggggaattcagtttcacctgtcatttctcagcggtttgaatgac
ggtgttgaggttgaggacgagcttgtcatattcgccgacatgggcagcgggtacccggac
gtgatctcgagcattgatgccaacgttattgttgtggaccaccacttcccggttggcagg
atagaggcgagaagggagttcgcgcacataaacccccatctggccggaatagacggctcg
tacgagctctcggcaagcggcacagcatttatattcgccaacgaggttggagacaactca
gacctctcgtccctcgcgcttctcgggatgattggcgataagcagaagatatccgggggg
aatgcggagatcgtaaagaaaggggtcgagagcgggcacattgacgagaaagaggggctc
cggatgatatcgggcagtgtgagagacgtgctcaggctgagcctcgagccctacctcgac
ttctactcaaaggaagaggagctcgaggagtttctggagagggtcagaattaacggagac
agggagtttgacgagctctcaagggaggaggagaggaggctcgcgaacgccatagttctg
agggttctgaacatgaactcctaccccggagtcgtcgaggacttcaccggaaagaagttc
ttcctgaagagcgagcttgtcagaaatgcggtgatgatgagcgagatcgtgaatgcgacc
ggcaggaaagcctcccagtcaatcggcttcgggatatgcatgagagatgaaagctattta
gagaagggacatgagctctggaggaagttcaccgtggagatacacgaggagatcgaaagg
aggaggcatgaggtcaaggaaggggaatgcataaggtacctgatcatggaggagggctca
tcaaccggccccatcgcctcggtgttttcccgctacctcttcgccgacaggccctttgtg
gcgataaacataaagaaggacgggagggtgaaggtctccgcccgctccaaccagaagctt
gcagagagggtcgatctggcggaggttatgaggatagccgcggagaaggtcggtggaagg
ggtggagggcacgttgtggcagctggagcgaacataagcgcggacgtggtcgatgaattc
gtgaaggaggtggacagactttgctgtacacagttaggctggagatag
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