Gottfriedia acidiceleris: MY490_17005
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Entry
MY490_17005 CDS
T08082
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_17005 (addB)
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY490_17005 (addB)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MY490_17005 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Nipped-B_C
ATPase_2
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
UPM53474
LinkDB
All DBs
Position
complement(3592127..3595633)
Genome browser
AA seq
1168 aa
AA seq
DB search
MAFQFILGRAGSGKTHHILNEMTDRLKIETKNIIFIVPDQMTFQMEYELVKRQEKKAIIN
SQVFSFTRLAWKVLQETGGISRIHIGEIGISMILRKIIEEKKEELKVFHHVADRQGFYKE
LTGLIAEFKGFQVSSDELSSVILQMEQDSSKDHIFIQQKINDIQIVFDAFNAYMKDKYLD
SEDYLNLLIQELPKSDYIKDSIIYIDGYYDLAPQERNVVEELLRCCSEVNFSLTLDRPYD
DFLPHELNLFYKPALLYQQIKEIVLNTKKTIKQPVLCHHNFRNQSNDLKYFETNFDNRPV
KPSFESDGIKIMSASNRRAEVNGIAKDIINKVRDQGYRYRDIAIYLRNGDSYSHLISTIF
HAYEIPIFIEEKRSMLTHPLFTFLQATFDIIQKNWRYESVFNAYKTELVYPFESNRDKNR
EQLELFENYCIAYGKQGKRWTVEEPWKYRKYRSTEGIDRGTTNEELEFEALINSVRDLLV
KPILTFQSNLKQAKNAREMCVALYEFVESVDISRKLQRLKDEAENRSNLIESKDHEQVWK
GFIQLLDECVELIGEEKLSRKTFFEILQTGFQSLQFANVPASLDQVNIADFDHSRLQNVK
CAYIIGVNEGVIPRKANEDGLLGDTAREFLQSFGVEVAPTSKHQLFVENFNIYTGINRAS
HELIISYPLASDDGKSLAPSSLIQRIKSIFPNIHQRFESGDLTFSSVEEQLTSITNYNTA
LTNLVSQLQVWSTKETEANMDLWWTLYNVLRENSDSKDKLYKVISSVMYNNVAKDLGEDL
STELYGEELSGSVSRIELFHQCAYAHFARYGLKLQEREIYKFESFDMGQLFHSALTIIGE
NLLQTGKSWSSLTNSECDELAAKVVDEISPKFQREILLSTNRYMFLKKKMKDVIAKVSSI
LSQQEHAGKFVPVALEVPFGIGKKLNSYELPIDGKRRMVLNGRIDRIDKATSEKGDYLRI
LDYKSTKKELKLSDVYYGLALQLLTYLDIAVANSTTLLGKNADPAGILYFHVQNPIVKVK
NNIELDEIQDEIFKKFKMNGLLLEDRESNTLMDEALIQDGSTSKIVPIRLKKTGEYMAKY
SKTVKPEQYPMMTNYIKQKFTEAGQQIYKGFVEANPYQQKDKIPCTYCSYQSVCQFDANV
KGNEYRVLPPLEDSEALQKMIEVVNKDE
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcaatttatattaggacgtgcaggaagtggaaaaacgcatcacattttaaat
gaaatgacagatagattaaagattgaaacaaaaaatatcatctttattgtacctgaccaa
atgacctttcagatggaatatgaattagttaagaggcaggaaaaaaaagcaattattaat
tcccaagtttttagctttactcgattagcatggaaggttctacaagaaacaggtggaatc
agtcggattcatattggtgaaattggaatttcaatgatacttcgaaagattattgaggaa
aagaaagaagaattgaaagtttttcatcacgttgctgatcgacaaggattttataaggaa
ctaacaggtcttattgctgagtttaaaggttttcaagtttcttcagatgaattatcttcc
gttatattacaaatggagcaagattcatcaaaggatcatatctttattcaacaaaagata
aatgatatacaaatagtgtttgatgcttttaatgcatatatgaaagataagtatcttgat
tcagaagactatttaaatttgttgattcaagaattacctaaaagtgattatataaaagac
agcattatttatatcgatggatattatgacttggcacctcaagagcgaaatgtagttgag
gagctattgagatgttgtagtgaggtgaatttttctttaacactcgatcgaccatatgat
gattttttaccacatgaattaaatttattttataaaccagcgcttctatatcaacaaatt
aaagagattgttttaaatacaaagaaaacaataaagcaacctgttctttgtcatcataac
tttagaaatcaatcgaatgatttgaagtatttcgaaacgaattttgataacagaccagtt
aagccttcgtttgaatcagatggaattaagattatgtcggcatctaatcgtcgagccgaa
gtaaatgggattgcaaaagatattattaataaggtacgtgatcaaggataccgatatcgt
gatattgccatttacttaagaaatggagattcctattcacatttgatttcaactattttt
catgcgtacgaaatacccattttcatagaagaaaagcgttcaatgctaacgcatccatta
tttacgtttttacaagctactttcgatatcattcaaaaaaattggcgatatgaatcagtt
tttaatgcatataaaactgaattagtttatccatttgaaagcaatcgtgataagaatcgt
gaacagctcgagttatttgagaattattgcatagcgtatggtaagcaaggaaaaaggtgg
acggttgaagagccatggaagtatcgaaagtatcgctcaactgaaggtattgatagaggg
acaacaaatgaagagttagaattcgaggcattaatcaattcagtaagagatttattagtt
aagccaattcttacatttcaaagcaatctaaagcaagcaaaaaatgcgagagaaatgtgt
gtagcattatatgaatttgttgaatcagtagatatttcaaggaagcttcaacgtttaaag
gatgaggcagaaaatcgatccaatttaattgaaagcaaagatcatgagcaagtttggaaa
gggtttattcaacttttagatgaatgcgttgaattaataggagaagaaaaactatcacgt
aaaacattttttgaaattcttcaaactggttttcaatctcttcaatttgcgaatgttcct
gcatcattagatcaagtaaacatagctgattttgatcattcaagattacaaaatgtaaag
tgtgcttatatcattggtgtaaatgaaggggttattccaaggaaggctaatgaagacgga
ttattaggcgacactgccagagagtttttacaatcatttggtgtggaagtagcaccaaca
agtaagcaccaattatttgtagaaaattttaatatctatactggaattaatcgagcaagt
catgagttaatcattagttatcctttagcaagtgatgatgggaaaagtcttgccccatca
agtcttattcaaaggatcaaatcgatttttccaaatatacatcaacgttttgaaagtgga
gacttaacatttagttccgtagaagaacagcttacatctattacaaattataatacagcg
ttaacgaatttagtctctcagcttcaagtttggtcgactaaggaaactgaagcgaatatg
gatttatggtggacgctttataatgttttacgagaaaattctgattcaaaagataaactg
tataaagtaataagtagtgtaatgtataacaatgttgcgaaagatcttggagaagattta
agtacagaattatatggggaagaattgagtggatcggtttcacgaattgagcttttccat
caatgcgcatatgcccactttgcacgatatggtctcaagctacaagaacgtgaaatttat
aagtttgaatcatttgatatgggtcaattattccacagtgctttaacaattattggagag
aatcttttacagaccggaaaaagctggagtagtttaacgaattcagaatgtgatgaatta
gcagcaaaagtagtagatgaaatctctccaaagtttcaacgtgagattttgctaagtacg
aatcgatatatgtttttaaagaaaaaaatgaaggatgttattgctaaagtatcctcaatt
ttaagtcaacaagagcatgcaggtaaattcgtccctgttgctttagaagtaccttttggt
ataggtaaaaagttaaattcttatgaacttccgattgatgggaagagaagaatggtatta
aatggtcgaattgaccgaattgataaagcaacaagtgaaaaaggcgattacctacgaata
ttggattataaatcaacgaaaaaggaattaaaattatcagatgtatactacggacttgct
ttacagttactaacatatttagatatagctgtagcaaattcaacaacattacttggaaaa
aacgcggacccggctggtattctttatttccatgtacaaaatccgattgttaaagttaaa
aataatattgaactcgatgaaattcaggatgaaatctttaaaaagtttaaaatgaatgga
ttacttttagaagatcgtgaaagtaatacgttaatggatgaagcattaattcaagacgga
agcacttcaaaaattgtgccgattaggcttaaaaaaaccggagagtacatggcaaaatat
tcaaaaacggtaaagccggaacaatacccaatgatgacgaattatataaagcaaaaattt
actgaagctggtcagcaaatatataaaggctttgtagaggcaaatccatatcagcaaaag
gataaaataccatgtacatattgctcgtaccaatcagtatgtcaatttgatgcaaatgta
aaaggaaatgaatatcgtgttctacctcctttagaagatagcgaagcattacaaaaaatg
atcgaggtggtgaataaagatgagtaa
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integrated database retrieval system
