Gluconobacter albidus: A0U94_06455
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Entry
A0U94_06455 CDS
T04736
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gal
Gluconobacter albidus
Pathway
gal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U94_06455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gal03019
]
A0U94_06455
Enzymes [BR:
gal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0U94_06455
Messenger RNA biogenesis [BR:
gal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0U94_06455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
AQS90666
UniProt:
A0A1U9KXV3
LinkDB
All DBs
Position
complement(1449679..1450860)
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AA seq
393 aa
AA seq
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MTTSQTPPASSNATPAAPAPGFEELGLIAPLLATLAQAGHKRPSLIQAQAIPPLLEGKDV
LVGSQTGSGKTAAFVLPMLQKLEEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLK
TRVICGGTPREQQVQSVSDGVDIVVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDED
FSASMTALTPYFPDHPPQTVFCSATLPEPVMDLAKRVTRNPVRVEIAAESFTPKNIRQRA
IFVEKDDKPETVARLLKHFEGRSIVFARTKNTVDALAKILRRHNLRIETLHGDRTQGARN
KALDLFRQGRVPILVTTDIASRGLDIPDVDLVINMDMPETPEAYVHRIGRTARAGRKGVA
FSLINVDERTFLRDVEKHIGYRVRIATEDSLDR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcccagacgccccctgcttcctcgaacgcaacgccagccgctcctgctccc
ggatttgaagagcttgggctgattgcccctttgctggcaactctggcccaggccggacac
aaacgcccgagcctgatccaggcgcaggccatccctcctctgttggagggaaaggatgtt
ctggtcggctcccagaccggtagcggcaagacggcggcattcgtgctgcccatgctccag
aagcttgaggaggccggcccggcgccgggaccccgcgcgctcattcttgaacccacgcgc
gaactcgccgcccagaccgctgccgtgtgccgtcagctcgggcgcaggctttccctgaaa
acacgcgttatctgtggtgggacgccgcgtgagcagcaggtccagtctgtgagcgatggc
gtggatatcgtcgtggcgacgcatggccgtcttttggatctggtcatgcaggccgacctt
gttctggaacatctgacctatctcgttctggacgaagccgaccgcctgctggacgaggat
ttctctgccagcatgacggccctgacgccctatttcccggatcacccgccccagaccgtc
ttctgttcggccactctgcctgaacccgtgatggatcttgccaagcgggtgacgcgcaat
cctgtgcgcgtggaaatcgcggcggagtcgttcacgcccaagaatatccgccagcgggcg
atcttcgtggaaaaggacgacaagcccgaaaccgtggcccgtctgctgaagcatttcgaa
gggcggagcattgttttcgcgcggacgaagaacacggtggacgcgctcgccaaaatcctg
cggcgccacaacctgcggatcgaaacccttcatggcgatcgcacgcagggtgcccgtaac
aaggctctcgacctgttccgtcaggggcgcgttcccattctggtgacgacagacattgcc
tcgcgcggtctcgatattccggatgtggatctcgtcatcaacatggatatgcccgaaacg
ccggaagcctacgttcatcgtatcggtcggacagcccgcgccggacgcaagggcgtagcg
ttttcgctcattaatgtcgacgaacggacttttctgcgcgatgtggagaaacatatcggc
tatcgcgtaaggatcgcgacggaagattcgctggaccgttag
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