Gordonia amicalis: IHQ52_02620
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Entry
IHQ52_02620 CDS
T08222
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gami
Gordonia amicalis
Pathway
gami03030
DNA replication
gami03430
Mismatch repair
gami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IHQ52_02620
03430 Mismatch repair
IHQ52_02620
03440 Homologous recombination
IHQ52_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gami03032
]
IHQ52_02620
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_02620
Enzymes [BR:
gami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHQ52_02620
DNA replication proteins [BR:
gami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IHQ52_02620
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IHQ52_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_19
AAA_14
Rad17
Mg_chelatase
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UKO92334
LinkDB
All DBs
Position
complement(555970..558588)
Genome browser
AA seq
872 aa
AA seq
DB search
MALYRTYRPATFADVVGQEHVTDPLSRALDSGRINHAYLFSGPRGCGKTSSARILARSLN
CAEGPTSRPCGTCSSCVALAPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLEKICEREGVTVAPEVYPLVIRAGGGSPRDSLSILDQLLAGADDQGVAYERALAL
LGVTDIALIDTAVDALASADGAALFGAVEKVVDAGHDPRRFAVDLLERLRDLILLQAVPD
AADRGLVEAPGDQLARMQSQIETLGPASLTRFAEIVHDALGEMRGTTSPRLLLEVMCARM
LLPAVSNDDAALLQRLERLESGIGSTSIPVPAKPAEPEPEPKFVRPSQRKAMEEAKAAEE
ARRAAAEEAEADVAVVAPTPPPPTPPAPMPTPPTPTAPEPVAPAPEPVAAEPVAAEPVAA
DPVFETPVVEESVVAEPVVADPVALMADVEDTTDDADMLEELSVEEPALDALPDPDALDL
GDLESADVEAPDAEAPDADAPDTDAPDTEAPDAEAPTLDLPVAAVESPVEAEATAPPAPE
PVRTDVTPSVRNGGTPTAPEPPSRARGAEPATEPAPEPGQSVHFDDIPLPDEPVDEYSVP
PPDAMPVRAKVPEPKPEPEPEPAPSGGLDADAVRTRYPEIRAAVRERSKSLEPMLSAAVI
ADLEGTTVVLAHPVEVLVGRLSAPHAVTIIREALAEVFGTPLDVRTVHQAPGTAVAPSVA
GGGQPTKPQAKPRQSYSRPSRARDQSVATAPAPEPVAEPEEPEPPRADEDIPDEERAEMV
ADARTGAPEQRLDPDLVALELLKSELGARPIE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtatcgcacctatcgcccggctaccttcgccgacgtcgtggggcaggagcac
gtcaccgatccgttgagccgtgccctcgactccgggcgcatcaaccacgcgtacctcttc
tctggtccgcgcggctgtggcaagacgtcgtcggcgcgaatcctggcgcggtcgttgaac
tgtgccgaaggccctacctcgcggccctgcggcacgtgctcgtcgtgcgtggcgctcgct
cccggtggaccaggcaatctcgacgtcatcgaactcgacgcggccagccacggcggcgtc
gacgacacccgcgagttgcgtgaccgcgcgttctacgcgccggccgagtcgcgttatcgc
gtgttcatcgtcgacgaggcacacatggtgaccaacgccggcttcaacgcactgctcaag
atcgtcgaggagccgccggagcatctcatcttcgtgttcgcgacgaccgagccggagaag
gtgctgccgacgatccgctcgcgcacgcaccactatccgttccgtctgctcgccccgccg
gtcatgcgcggtctgctggagaagatctgcgagcgcgagggtgtgacggtcgcacccgag
gtctacccactggtcatccgtgccggtgggggttcgccgcgtgactcgctgtcgatcctc
gatcagctcctcgccggcgccgacgaccagggcgtcgcctacgagcgtgcactcgcgctg
ctcggtgtcaccgacatcgccctcatcgacaccgccgtcgacgcattggcgtcggccgac
ggcgcggcgttgttcggggccgtcgagaaggtcgtcgacgcgggtcacgatccccgccgt
ttcgcggtcgacctcctcgaacgactccgcgacctgatcctgctgcaggccgttcccgat
gctgccgaccgtgggctcgtcgaggcgccgggcgatcagctcgcacgcatgcagagtcag
atcgagacgctcggtcccgcctcgttgacgcgcttcgccgagatcgtgcacgacgccctc
ggcgagatgcgcggcaccacgtcgccgcgcctcctcctcgaggtgatgtgcgcgcgcatg
ttgctgcccgcggtgtcgaacgacgacgccgctctgctgcagcggctcgagcgtctggaa
tcggggatcggttcgacgtcgatcccggtgccggcgaaacccgctgagccagaaccggaa
ccgaagttcgtgcgcccgtcgcagcgtaaggcgatggaagaggcgaaggcggctgaagag
gcccgtcgcgccgcggcggaggaagccgaggccgatgtcgccgtcgtggcaccgacgccc
ccgcccccgacgcccccggcgccgatgccgacaccgccgacaccaaccgcgccggagcct
gtcgcgccggcacccgagcccgtggccgctgaacccgtcgccgctgaacccgtggccgct
gacccggttttcgagacacctgtggtcgaggagtcggtcgttgcggagccggtcgttgcc
gatccagtcgcgctgatggccgacgtcgaggacaccaccgacgacgcggacatgctcgag
gagctgagtgtcgaggagcctgcgctcgacgccctccccgacccggatgcgctcgatctc
ggggacctcgaatccgcagacgtcgaagctccggacgccgaagctccggacgccgacgct
ccagacaccgacgctccagacaccgaagctccggacgccgaggcgccgacgctcgatctc
cccgtcgccgcagtcgagtcgccggtcgaggcagaggcaacagcgccgccggcgccggaa
cccgtgcggaccgacgtcaccccctcagtccggaacggcggcaccccgacggcgccggag
ccaccgtcgcgcgcacggggggccgaaccggccacggaacccgcccccgagccggggcag
tcggtccacttcgacgacatcccgttgccggacgagccggtcgacgagtactcggtcccg
ccgcccgacgcgatgccggtgcgggcgaaggtgcctgagccgaaaccggaaccggagccc
gaacctgctccctccggtggactcgacgccgacgccgtccgcacgcggtacccggagatc
cgggcagcggtccgcgagcgttccaagagtctcgagccgatgttgtcggcggcggtcatc
gccgatctggagggcaccacggtggtcctggcgcatccggtcgaggtgctcgtcggacga
ctctccgcgccgcatgcggtcaccatcatccgtgaggcactcgccgaggtcttcggcaca
ccgctcgacgtgcggacggtccaccaggccccgggcactgcagtcgcgccgtcggtggcc
ggcggcgggcagccgacgaaaccgcaggccaagccccggcagtcgtactcgcggccgagt
cgtgcccgggaccagtcggtggccacggcccccgcgcccgagccggtggccgaaccggag
gagcccgagccgccacgcgcggacgaggacatccccgacgaggagcgggccgagatggtc
gccgatgcgaggacgggagcgcccgaacagcgcctggatcccgacctggtggccctcgag
ctgctcaagtcggaactcggggcacggccgatcgagtga
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