Gordonia amicalis: IHQ52_15045
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Entry
IHQ52_15045 CDS
T08222
Name
(GenBank) DUF6531 domain-containing protein
Organism
gami
Gordonia amicalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
Tox-HNH-EHHH
OCRE
DUF4595
Motif
Other DBs
NCBI-ProteinID:
UKO90369
LinkDB
All DBs
Position
complement(3279834..3286232)
Genome browser
AA seq
2132 aa
AA seq
DB search
MDPFGIIEGGREFVGGLVDGATDLVGKGLRAVGLETIAIEVEDFGDDIANSMGAMPDEKE
LGRTNDPKELILGDPGAITAAAGTFEGFAGNFTKAGEGLRGISAGNWAGDGADGFHDAMG
QQVPRWFAAAEAASNAAAALTKWAGVVEFAQQKATDAIRIWEEGERLRDEWKAKAETYNA
ELDDYRNDRRDTPPVHPGPNPWPEYQREARRVLKVGRDHRNSAAPGTKSELSAAANLAPP
MPSAFEQAQMEAKDIGAGAATAFNHFEFGLIGAGTEMFKSLWMLAPQNPYNVARPHQYVR
NSAGLIIGITNQVAHPDAAVRNFVGGGWSTDPASSFGTLLGNVAATAAPGPKGLSLLKLT
KAAPDVPTPSPRPHAGTAPDAPAPTAPTSPTPSAPHPASPDGSAPTPGATPSRDLPVHHG
PDLPTHERPLPPEPDPGPTPGTPAQSESSSSAPVPDHAAPPPGPPEPTPAAGPPHSPTPR
SDSATPDQPVGGGTFDSPSPTSPHSGDPAPTSTPAATSATRTDAPDASTPDAGDTTPGGR
GSGDDDPPGPDRGETTTPAVEHSPGGNSLSTKNDGDAGGQNVGHHDDPDARGSDVTPTNV
DHAPTKSDGDGIGQPVVRNDEPSGPYPSKPVDDNASPGPHPVRPDADTPGPNARPTPTVH
PESPVGSHNGPDASTRTPSDGQSPNGTPVVPVSGPHPVSGPHAPSHAVPDAGQPKPTSAP
VSPGAAARADTPAAPPRAPDHTPDRTTPARTTPDNATPARDGARPTPSNAHNVPEPTGRH
TPDRDAGSPTNTRIMPDDRPIPPAAFPDRPITPDRSPTPNHRDTTPDSPSSPRNPDQPNG
PDSDNPEIDHDTREAHDPANPGRTDEGAPDRADTSEGNEAPTQCRSNGEPVNVASGEYFL
PLTDVELPGVLPLRLTHRHRSRYRWGRWMGPTTPSSFDARALVGDELVTIVDADGTLTNF
PKPEGDSVSRSVNASDWELRTTPTGGYQVTHVRDRVSWFFVPIPELGGVDVRAGDIAVSA
MTDRHHNRFEFIFDDRGRPSAVEHSAGYRIEVRCDGARILGYRLTAGVDGVPVDQQLSTF
DYHQGNLAAVTNAVGGTTYFGYDDAARMTWWRDSLGMEYWNRYDDLGRVTIQSGMNGVWS
GRFEYHLRPDGLGSYTTYRDAVGATTVYGIDTDGRVRQESDPAGRVTATDYNANRQPLSI
TSPGGARTLLRYNAFGDVEQIVAPDGKVTEVSYAGPGQPERIVEPGGITTRIGHDDNGLP
TSVVDNAGAVTSYTYDEHGALTSRTDPDGVVVRYRNNAAGLPVAISDTLGNTTRITYDGF
GRPTEVVDAEGARTVVTYDAMGNRTSVIAPDGGRSRWEYDGEGNCVAYTDPVGAVTRWEY
GHYDLPVARIDADGSRTEFSYDATRRLVAVTNPDDLVWTYTYNADGSLASETDFNNATTT
YIYEGEGRLTSRTNDAGQTVSFTYDAAGRLIIDRTADPINPDLDGETTEYSFDAAGRLES
ATGVFGRWHTSYTAAGLPQLTGVDDGQSDWVIESAWTGAGRLASLTSPTGVNTRYGYDPR
GVLDFLSSAGRSCDITTSPTGREQRRRFEGSAIDSTWDPVGRLIGRTIMDVAERPSGLNL
GVGGTSAGEKRPDRTVAAAEYSYRSDGILTSLTSTLTAGRTDYRVDVLGRVVAATSPSGS
EQFSFDATGNITEYASTGESNHDPEVRGASDPSLPEVRGASDPLLPEVRGASRASKGRRR
YSGTLLVDDGRTSYRYDAAGRAISMSRRRLSRKPDVWHYVWDAHDHLRSVTTPDGTAWSY
TYDHVGRRLSKTNQSTGATTRFHWHGEHLVEQIDIAPGPEQELQATTWSYSPAAFVPLAQ
TSTSEPISPIEDGPGPGGTSGQDGDLSLNLGGRTPATQPALQWSQSEVDREFFAIVTDQI
AAPTALIEPNTGEVAGRSVRTLYGKTAWTGASTPWSYPGQYLDTETGLHYNRHRYYHPST
GLYLSPDPLGLAPAPNPYAYPRNPTIWADPLGLAPTGSCDDSSRRRRGRDVHSADDAQPN
RPPDRSPEGAGRRGAFRQAKRDWGIPVSQHPYEVLENLDRRENRQPGYRYRFRVNGRTIE
IRDDAGGHVFADDPRQNRGPHFNTPDGEHYDY
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
atggatccattcggcatcatcgagggcggacgggaattcgtcggcggactcgtcgacggt
gccaccgatctcgtcggcaagggtctccgtgcagtagggctcgagacgatcgcgatcgaa
gtcgaggacttcggagatgacatcgcgaattcgatgggcgccatgcccgacgagaaagaa
ctgggaagaacgaacgacccgaaagagctcatcctcggggatcccggcgcgatcaccgca
gccgcaggcacattcgagggattcgcaggcaacttcacgaaggccggagaaggactccgc
ggaatctcggccggcaactgggccggtgacggcgctgacggattccacgacgccatgggc
cagcaggttccgcggtggttcgccgccgccgaggccgcgtcgaatgccgctgcagctctg
acgaaatgggcaggcgtcgtcgagttcgcccagcagaaggcaaccgacgccatccggata
tgggaggaaggcgaacgtctacgcgacgaatggaaagccaaggccgaaacctacaacgcc
gaactcgacgattatcggaacgaccgccgcgacaccccgcccgtccatcccggaccgaac
ccctggccagagtatcaacgcgaggcgagacgagtcctgaaagtcggtcgtgatcaccgg
aattcggctgcaccaggcacgaaatccgaactcagcgccgccgcgaacctggcaccgccc
atgccctcagccttcgaacaggctcagatggaggccaaagacatcggagccggcgccgcc
acggcgttcaaccatttcgagttcgggctcatcggcgcggggaccgagatgttcaagtcg
ctgtggatgctcgccccgcagaatccgtacaacgtcgccagaccgcatcagtacgtacgc
aactccgccgggctgatcattggcatcaccaaccaggtcgcccaccccgacgccgctgtc
cgaaactttgtcggtggcggatggtcgaccgatccggcgagcagcttcggcaccttgctc
ggaaatgtggcggcgactgccgctccgggacccaaaggtctgtcacttctcaaactcacc
aaagcggcgcccgacgtaccgacaccgtcccccaggccgcacgccggaacagctcccgat
gcgccggcgcccaccgccccgacgtctcccaccccgtctgcgccccatccggcatctccc
gacggctcggcgcccacacccggagccaccccgtcccgagatctgcctgtccaccacgga
cccgatctacccactcatgagagaccgcttccaccagagcccgaccccggtcccactccc
ggaacgccagcccaatccgaatcgtcgtcctcggcccccgtgccagatcatgctgccccg
ccaccgggtccacccgaacccacacccgcagcggggccaccgcactcgcccacaccacgt
tccgattccgccacgcccgatcaacccgtcggcggcggtaccttcgacagtccatcaccg
acctcgccacactcaggtgacccagctcctacatccacaccggcagccacttcggcgacg
cgaacagacgcaccggacgcgtccacgccggacgcgggagacaccacaccgggcggtagg
ggatcaggtgatgacgacccgccaggtcctgatcgcggagaaacgaccacacccgccgtc
gaacacagtcccggtggcaattcactgtcaaccaagaacgacggtgacgccggcggacag
aacgtggggcatcacgacgacccagacgcccgcggaagcgacgtcacaccgaccaatgtt
gaccatgcaccgaccaaatcggatggcgacggcatagggcaaccggtcgtgcgcaacgac
gaaccttcaggtccctatccgtccaaacccgtcgacgacaacgcgtcgcctggaccacac
cctgttcgtccggatgcggacacacccgggcccaacgcgcggccgacaccgacggtccat
cccgagtcacctgtcgggtcacacaacggacccgacgcctcgacgaggactccctcagat
ggtcagtcaccgaacgggacgccggtcgtacctgtctctggaccgcacccggtgtcgggg
ccgcacgctccttcacacgccgtgccggacgcaggccagccgaagcccaccagcgcaccg
gtcagtcctggtgctgccgccagagccgacacgcctgccgcacctccacgggcccccgat
cacacacccgaccgcaccacaccggcgcggaccaccccggacaacgccacccctgcacgc
gatggcgctcggccgactccgtcgaacgctcacaacgtgccggaaccgactggccggcac
actccggaccgcgacgccgggagtcccaccaacacgcggatcatgccggacgaccggccg
attccgccggctgcgttcccggaccgtccgatcacacctgatcgttcgcccacaccgaat
caccgcgacacgacgccggattcgccctcgtcgccgcgaaaccccgaccagccgaatggt
cccgactcggataaccccgagatcgaccacgacacccgtgaggcccacgacccggcgaac
cccgggcgcaccgacgaaggcgctcccgatcgtgccgataccagcgagggcaacgaggca
ccgacccaatgccgcagcaacggcgaaccggtcaacgtcgcatcaggggagtacttcctg
ccgctgaccgacgtcgagttgccgggcgtactcccgctgcgcctgacgcatcgtcatcgt
tcgcggtatcgatggggccgctggatgggcccgaccacaccgtcgagcttcgacgcgcgg
gccctcgtcggcgacgaactcgtcacgatcgtcgacgccgacggcactttgacgaatttc
cctaagcccgagggtgattcggtgtcgcggagtgtcaacgcgtccgattgggagctacgg
acgacccccacgggcggctatcaggtcacccacgtccgcgaccgggtgagctggttcttc
gttccgatccccgagctcggcggcgtcgacgtgcgcgccggggatatcgcggtctcggcg
atgaccgaccgccaccacaatcgattcgagttcatcttcgacgaccgcggacgaccgtcg
gcggtggaacattcggccggctaccggatcgaggtgcggtgcgacggcgcccgtatcctc
ggttaccggctgaccgcaggcgtggacggtgtcccggtcgaccagcagttgagcaccttc
gactatcaccagggcaatctcgcggcggttaccaacgcagtcggtggcacaacgtatttc
ggctacgacgacgccgcgcgcatgacctggtggcgtgactcgctgggcatggagtactgg
aaccgctacgacgacctcggacgcgtgacgatccagtccggcatgaacggtgtgtggtcg
ggccgattcgagtaccacctccgcccagatggcctcggctcgtacacgacctaccgcgac
gccgtcggcgcgaccaccgtatacggcatcgacaccgacggacgcgtgcgccaagaatcc
gatcccgccggacgcgtcaccgcgaccgactacaacgccaaccgtcagccgctgtcgatc
accagtccgggtggcgcgcgtacgttgctgcgctacaacgcgttcggcgacgtcgagcag
atcgtcgcgcccgacgggaaggtcaccgaggtctcctacgctgggcccggacagccagag
cggatcgtcgaaccgggcggcatcacgacgcgaatcggtcacgacgacaacggtttaccg
accagcgtcgtcgacaacgccggtgcggtcaccagctatacgtatgacgagcacggcgcg
ctgacgtcgcgcaccgaccctgacggcgttgtcgtacgttatcgcaacaacgctgccggg
cttccggtcgcgatctcggacacgctcggcaacaccacgcggatcacctacgacggcttc
ggacggccgacagaggtcgtcgacgccgagggcgcacggaccgtcgtcacctacgacgcg
atgggtaaccgaacgagtgtcatcgcgccggacggcggtcggtcgcgatgggagtacgac
ggcgaaggcaactgcgtcgcatacaccgatcccgtcggcgccgtaacccgttgggagtac
gggcattacgacctgccggtcgcacggatcgacgccgacgggtctcgcaccgagttcagc
tacgacgccacacgtcgcctggtcgcggtcaccaaccccgacgacctggtgtggacatac
acctacaacgcagacgggtccctggcgtcggagacggacttcaacaacgcgacaacgacg
tatatctacgagggtgagggtcgactgacgtcacgcacgaacgatgcgggtcagacggtg
tccttcacctacgacgcggcaggtcgcctcatcatcgaccggactgccgacccgatcaac
ccagacctcgacggcgagacaacggaatacagcttcgatgccgctggtcgactcgagagc
gcgaccggtgtctttgggcgctggcatacgagttacaccgctgctgggctgccgcagctc
accggtgttgatgacggtcagagcgactgggtcatcgagtctgcctggactggtgcagga
cgcctggcctcgctcacgtcgccgacaggcgtcaacactcggtacggatacgacccgcgt
ggtgttctcgacttcctgtccagcgccggacgctcctgcgacatcaccacgagcccgacg
ggtcgcgagcagcgtcggcggttcgagggctcggcgatcgattcgacgtgggacccggtg
ggccgccttatcgggcggaccatcatggacgtggcggagcgaccgtcgggtttgaatctc
ggcgtcggtggaacgagcgcgggggagaagcggcccgatcggactgtcgcagctgccgag
tacagctaccgttctgacggcatcctcaccagtttgacgtcgacactgaccgctggtcgt
accgactaccgggtcgacgtgctcgggcgggtggtcgccgcgacgagtccctcggggtct
gagcagttctcgttcgacgcgaccggcaacatcaccgagtacgcctccacgggtgagagt
aaccacgaccccgaggtgcgaggcgccagcgacccatcgctccctgaggtgcgaggcgcc
agcgaccccttgctccctgaggtgcgaggcgccagccgagcctcgaagggccgccgccgc
tactccggcaccctcctcgtcgacgacggccgcacctcctaccgctacgacgccgccggt
cgggctatctcgatgagtcgtcggcggctgtcacgcaaaccggatgtctggcactacgtc
tgggatgcccacgatcacctgcggtcggtgaccaccccggatggcacggcgtggtcctac
acctacgaccacgtgggacgacgactgtcgaagacgaaccagtcgaccggcgcaaccaca
cgctttcactggcacggcgagcatctcgtcgagcagatcgacatcgcgcctggtcccgag
caggagttgcaggcgaccacgtggagttattcgccggccgccttcgtcccgctggcgcag
acttccacatccgagccgatcagcccgatcgaggatgggccagggcccggtggcacaagt
gggcaggacggcgatctcagtctgaatctcggcggcaggactcccgctacgcaaccggcg
ctgcagtggtcgcagtcagaagtcgaccgggagttcttcgcgatcgtgaccgaccagatc
gccgcaccgaccgcgctgatcgaaccgaacacaggcgaagtcgccggccgatcggtcagg
actctgtatggcaagaccgcatggaccggagcatcaacaccctggtcgtaccccggtcag
tacttggacaccgagaccggactgcactacaaccgtcaccgctattatcacccgagcacc
ggtctgtacctcagtccggacccactcgggctggcgccggcgccgaacccttatgcctat
ccgcgtaacccaacgatctgggccgaccctctcggattggcgccgaccggctcttgcgac
gactcgagtaggaggcgccgaggtcgcgacgtccatagcgccgatgacgcgcaacccaac
cgacctccggatagatctccggaaggtgcaggacgtcgtggcgcgttccgtcaggccaag
cgagattggggaatcccggtgtcacagcatccgtatgaggtgctcgagaacctcgataga
cgggaaaataggcagcccggttacaggtataggtttagagtgaacggtcggacaatcgaa
atccgtgacgatgctggcggacacgtcttcgcagatgatccccgccagaatcggggccca
catttcaataccccagatggcgaacactatgactattga
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