Gilliamella apicola: GAPWK_1477
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Entry
GAPWK_1477 CDS
T03066
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gap
Gilliamella apicola
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gap03016
]
GAPWK_1477
Enzymes [BR:
gap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GAPWK_1477
Transfer RNA biogenesis [BR:
gap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GAPWK_1477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AHN26052
LinkDB
All DBs
Position
complement(1604619..1605707)
Genome browser
AA seq
362 aa
AA seq
DB search
MSYQYIVNNKQLIDYCSKIGNSTALALDTEFVRTRTFYPHLGLLQVFNGEHAALIDPINI
TDWHAFLSILSNPNIEKYFHSCSEDLEVFFHKFGSIPTPIIDSQILASFLDNPLSSGYAN
LVNKYLQVELDKSETRTDWLKRPLTDKQCEYAINDVLYLYPLVNILKAQLTSKGYLEAAY
QESQMVVTRKCETIDPNDAYLNIKNSWQLKGRSLGQLYKLASWRYKLAKEQDLALNFVVH
EKTLWNIARYSPSSLAQLGNLGLKGKEIRLYGQKILNILSEPVPALPPICRVTSYPNYKK
TSDELKLIAQDICSHTGLNQDLLLSRRLINQYVKWQVDKNGSQPELLSGWREPLFRQYGL
SL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttatcaatatatagttaataataagcagttaattgattattgttcaaaaatcgga
aacagcactgctttggccttggatactgaatttgttcgtacacgaacgttctatcctcat
ttaggacttttacaagtttttaatggtgagcacgcagcgctcattgatccgattaatatt
actgattggcatgcttttttaagcattttaagtaatcctaacattgaaaagtattttcat
tcctgtagcgaagatcttgaagttttttttcataagttcggctctattccaacacctatt
attgatagccaaatcttggcttcatttttggataatccactaagtagtggttatgcaaac
ttagttaataaatatttacaggtggaactcgataaaagtgaaacgagaactgactggcta
aagagaccattgacggataaacaatgtgaatatgcgattaatgatgtgttgtatttgtat
cctttagtcaatattttaaaagcacaattaacctcaaaaggatatttagaagcagcctat
caagagagccaaatggttgtcacccgtaaatgtgaaacaatagatccaaatgatgcttat
ttgaatatcaaaaacagttggcaattaaaagggcgaagtttaggtcaattatataaatta
gccagttggcgttataaattagcgaaagaacaagatttagcactgaattttgttgtacat
gaaaagacgttatggaatattgctcgatactcaccatcatcattagcacaactgggcaat
ttgggcttaaaagggaaagaaatccgtttatatggacaaaaaatattaaatattttgtcc
gaaccggttccggcattaccgccgatttgtagggtaacgagttaccctaattacaaaaaa
actagtgatgaattaaaactaatcgcccaagatatttgttctcatactggattgaatcaa
gatttattactttcacgacgcttaatcaatcaatatgtaaaatggcaagtggataaaaac
ggaagccaaccagaactgttatctggttggagagagcctttatttagacaatatggttta
tcgctttaa
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