Gilliamella apis: RAM11_07700
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Entry
RAM11_07700 CDS
T09380
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gaq
Gilliamella apis
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaq03032
]
RAM11_07700 (topA)
03400 DNA repair and recombination proteins [BR:
gaq03400
]
RAM11_07700 (topA)
Enzymes [BR:
gaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RAM11_07700 (topA)
DNA replication proteins [BR:
gaq03032
]
Prokaryotic type
DNA Topoisomerases
RAM11_07700 (topA)
DNA repair and recombination proteins [BR:
gaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAM11_07700 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
zf-TFIIB
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
WLT05748
LinkDB
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Position
complement(1685182..1687782)
Genome browser
AA seq
866 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPVSGSSQRTEKTSKDKAEKKVKR
SEKQVLVDRMSVDPYNGWQAHYEILPGKERVVAELKKLAKDADMIYLATDLDREGEAIAW
HLKDVIGGDDNKYRRVVFNEITKTAIKNAFNHPAMLDMDRVNAQQARRFMDRVVGFMLSP
LLWKKVARGLSAGRVQSVAVRLVVEREREIHAFIPEEYWDLYADLKTAHQEQLTMQVTHY
KNDAFEPKDRVAIDIALDELNKSQYQVTNIEEKPTKSNPTAPFITSTLQQAASTRLGFGV
KKTMMLAQRLYEAGYITYMRTDSTNLSQDALTMVRDYIGQNFGEKYLPKSANIYSSKKNS
QEAHEAIRPSDVNILADSLGDVEADAAKLYQLIWRQFVACQMTSAEYNSTTITVKAGDFT
LKAKGRTLRFDGWTKVQPQLTKNNEDKMLPAVSMQDMLELIGLDPNQHFTKPPARYNEAS
LVKELEKREIGRPSTYATIISTIQDRGYVRLDNRRFYAEKIGEIVTDRLSENFNDLMSYD
FTARMEHALDEIANKKQEWREVLDQFFDDFSQHLTIAEQDPDRGGMQLNPLVLTPEIKCP
NCGREMGIKTAGTGVFLACSGYALPPKERCKQTINLIPEYETLNILEEAETAETDALRAL
KRCPKCHTAMDSYLLDNERKLHICGNNPICDGSLVEKGTFKVKSYEGPIIECEKCGSEMH
LKSGRFGLYMGCTNQDCKNTRKILKNGDVAPPKEDPVDLPELKCTKSDAHFVLRDGASGI
FLAAHNFPKSRETRAPLIEELQRFKDRLPEKFIYLTQAPSQDPEGNPAIVRFSRKSKQQY
VTSEVNGKSTGWVMQYVDGKWVNSKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcccttgttattgtggaatcaccagccaaagcaaaaacgattaataaatat
cttggcaaagatttcgtagttaaatcaagtgtcggacatattcgcgatcttccagtgagt
ggtagtagtcaacgcactgaaaaaacaagtaaagataaagccgagaaaaaagttaaacga
tcggaaaaacaagtgttagtcgatcgtatgagcgttgatccttacaatggctggcaagcg
cattatgaaattttacctggcaaagaacgagtggttgccgaacttaaaaagttagccaaa
gatgccgatatgatttatctcgcaaccgacttggatagagaaggggaagctatcgcttgg
catctaaaagacgttattggtggtgatgataataagtatcgtcgagtcgtatttaacgag
ataaccaaaacggcgattaaaaatgcttttaatcatccagccatgttggatatggatcgg
gttaacgctcaacaagcaagacgatttatggatcgtgtggttggctttatgctatcacca
ctactttggaaaaaagtcgctcgtggcttatcagcaggtcgtgttcaatcagttgcggta
cgcttagtggttgaacgtgagcgagaaattcatgcatttattcccgaagagtattgggat
ctttatgctgatttaaaaactgctcatcaagaacaattaacaatgcaagtaacgcattat
aaaaatgatgcgtttgaacctaaagatcgtgttgctattgatattgctttggatgaatta
aataaaagccaatatcaagtcactaatattgaagaaaaaccgactaaaagtaatccaaca
gcaccgtttattacttcaactttgcaacaagcggcaagtacccgtttaggttttggtgtt
aaaaagacgatgatgttagcacaacgcttatatgaagctggttatattacttatatgcgt
accgactctactaatttgagtcaggatgcgttaaccatggttcgggactacattggacaa
aacttcggtgagaagtatttgcctaaatcagctaacatttatagcagtaagaaaaattcg
caagaggcgcatgaggcaattcgtccatcagacgtgaatattctagcggatagtcttggc
gatgttgaggctgatgcagctaaattatatcaattaatttggcgtcaatttgtggcttgc
caaatgacatcagccgaatacaactcaacaactattacagttaaagcgggtgattttacc
ttaaaagctaaaggtcgaaccttgcgtttcgatggttggacaaaagtgcaaccacaatta
actaaaaataatgaagataagatgttgccagcagtatctatgcaagatatgttggaatta
ataggcttagatcctaatcaacactttactaagcctccagctcgttacaacgaagcttca
ttagttaaggaacttgaaaaacgagagattggtcgtccttctacttatgcaacgattata
tcaactattcaagatcgtggttatgtacgattagataatcgtcgtttttatgcggaaaaa
attggcgaaattgttacagatcgcttaagtgaaaatttcaatgacttaatgagttacgat
tttacagctcgcatggagcatgcacttgatgaaattgccaataaaaagcaagaatggcgt
gaagttttagatcaattttttgatgatttcagccaacacttaaccattgcagaacaagat
cctgatcgtggaggtatgcaacttaatccactagttttaacaccagaaattaaatgccct
aattgtggtcgtgaaatgggcattaaaactgctggtaccggtgtatttttagcgtgttct
ggttatgcgttacctcctaaagagcgttgtaagcaaacaattaatttaattcccgaatat
gaaacattaaatattttggaagaggcagagacagccgaaactgacgcactaagagcactt
aaacgttgtcctaagtgtcatacggctatggacagttatttgctcgataatgagcgtaaa
ttacatatttgtggtaataatccaatctgtgatggttcgttggttgaaaaaggcacattt
aaggtaaaaagctatgaaggtccaattattgaatgtgaaaaatgtggatccgaaatgcat
cttaaatcaggccgttttggactttatatgggatgtaccaatcaagattgtaaaaatact
cgtaaaatcttaaaaaatggtgatgtagcgccacctaaagaagatcctgttgatctgcct
gagttaaaatgtactaagtcagatgcacattttgtattacgagatggtgcttcaggtatc
tttttagctgcacataattttccaaaatcaagagaaactcgtgcaccactaattgaagag
ctacaacgttttaaagatcgtctacccgaaaaatttatttatttaacgcaagcgccgagt
caagatccagaaggtaatccagctattgtgcgatttagtcgtaaaagtaaacagcagtac
gttacttcggaagtcaatggcaaatcgactggctgggtaatgcaatacgttgatggtaaa
tgggttaatagtaaaaaatag
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