Gracilinanus agilis (agile gracile opossum): 123234460
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Entry
123234460 CDS
T07702
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04512
ECM-receptor interaction
gas04514
Cell adhesion molecules
gas04820
Cytoskeleton in muscle cells
gas05144
Malaria
gas05205
Proteoglycans in cancer
gas05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123234460 (SDC1)
04514 Cell adhesion molecules
123234460 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123234460 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
123234460 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
123234460 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
123234460 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123234460 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gas04090
]
123234460 (SDC1)
00535 Proteoglycans [BR:
gas00535
]
123234460 (SDC1)
Membrane trafficking [BR:
gas04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
123234460 (SDC1)
CD molecules [BR:
gas04090
]
Proteins
123234460 (SDC1)
Proteoglycans [BR:
gas00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
123234460 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
123234460
NCBI-ProteinID:
XP_044516294
LinkDB
All DBs
Position
2:2081640..2085596
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AA seq
217 aa
AA seq
DB search
MSRKTKGLATPSTVAPAKPENSSRGGASGEGSALVPARRPAEEPTLPPELPPPSPTATLP
STTRPPLTVGATVAPDPGTAQPGAPEPPSSGDEGSSASGQAERGSGQRPTEESSGSGSED
FTFLAPGEQPGLAVEKKTPEGPAGGEATGASQGILDRKEVLGGVIAGGLVGLLFAVLLVG
FMLYRMKKKDEGSYSLEEPKQANGAYQKPQRQEEFYA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaagacgaaggggctcgccacaccctcgaccgtggccccggccaagcctgag
aacagcagccggggaggagcctcgggagagggatccgcactcgtgccggccaggaggccc
gcggaggagcccacgctgcccccggaactccccccaccatctcccacagcgacgctcccc
tccaccacccggcctcctctgactgtgggagccaccgtggctccggaccccggcacggcc
cagccaggggcgcccgagccccccagctccggagacgagggctcctcggccagcggccag
gcggagagaggctccggccagcgccccacggaggagagctcggggagcgggagcgaagac
ttcaccttcctggcacccggagagcagcctgggctggctgtggagaagaaaacccctgag
ggaccggccggcggagaggccacgggggcctcccagggcatcctggaccgcaaggaggtt
ctaggaggcgtcatcgccggcggccttgtggggctgctcttcgccgtcctcctggtggga
ttcatgctttatcggatgaagaagaaggacgaaggcagctactccctggaggagcccaag
caggccaacggcgcctaccagaagcctcagcggcaggaggagttctatgcctga
DBGET
integrated database retrieval system
