Gracilinanus agilis (agile gracile opossum): 123235024
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Entry
123235024 CDS
T07702
Symbol
NPC1L1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04975
Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
123235024 (NPC1L1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gas02000
]
123235024 (NPC1L1)
Transporters [BR:
gas02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
123235024 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
123235024
NCBI-ProteinID:
XP_044516985
LinkDB
All DBs
Position
2:238222639..238261895
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AA seq
1343 aa
AA seq
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MLSLLGPSLSTEMVEPGFRGVLFLVVLLHLVHGESYTPIHEANRCAFYDDCGKNPELSGS
LIPLSNVSCLSNTPAVQVSGIHLQLLNDLCPQLYQGPNSTYACCSYKQLVALESSLKVTK
ALLTRCPACAENFASFYCHNTCSPNQSVFINVTRISNISGTNSSKVLAYEAFYTRSFAER
AYDSCSKVQIPATGGLAVGAMCGVYGSNLCNAQRWLNYQGDTGNGLAPLEITFNLMDPGQ
VLGNGMEPLDAETWGCNETRGNSSNACSCQDCAAACPVIAHPAMQDSTFRLGRMHGGLAM
AILLSAVFVSFFTFLVVRSCWKTKAKKPQQGVRCSDRFSYFAHVILGKLFQSWGTWVASR
PKTVLCVSTVLVMGLSSGLVFLELTTNPVELWSAPNSQARREKEFHDRYFGPFFRTNQVI
LTASNRSSYTYDSLLLGSKNFSGILSEDLLLQLLELQEELRHMEVWSEEEQRNISLRDIC
YAPLNPNNPSLGDCCINSLLQYFQSNRTNFLLTANQTLMGHTAQVDWRDHYLYCVNSPLT
FKDGTTLALSCMADYGAPVFPFLAVGGYTGQDFSGAEALLLTFSLNNYPAGDPRLAQALL
WESRFLEVMRDFQKRTAGTFEVTFMAERSLEDEINRTTMEDLPVFATSYAIVFLYISLAL
GRYSSRSRILVDSKITLGLGGVLVVLGSVLSSMGFFSYLGIPSSMVIIQVVPFLVLAVGA
DNIFIFVLEYQRLPRLSEERREVHIGRVLGTVAPSMLLCSLSEAICFFLGALTSMPAVRT
FALTAGLAIIFDFLLQMSAFVALLSLDNKRQEASRLDLCCCANPRKLPPPPEGESLLLRF
FRKFYAPFLLHGFTRIVVLGLFMALFGWSLYLMCQINVGLDQELALPEDSYLLDYFLFLN
RYFEVGVPTYFVTTSGFNFSSLDGMNSICSSSGCDAYSFTQKIQYATEFPKESYLAIPAS
SWVDDFIDWLTPTSDCCRLYRNNTFCPSTENSPLACFQKCVPYTLSSVRPTVEQFHKYLP
WFLEDKPNIKCPKGGLGAYDVSVNISADGEILATRFMAYHTPLKNSQEYTAALRAARELA
ANITADLRRVPGTDPKFEVFPYTVTYVFYEQYLTIVPEGLFILGLCLIPTFAVSCLLLGM
DLRSGFLNLFSIIMILVDTVGFMTLWGISYNAVSLINLVTAVGISVEFVSHITRSFAIST
KPTRLERAKETTIIMGSAVFAGVAMTNLPGIIILAAAKAQLIQIFFFRLNLLITVFGMLH
GLIFLPVILSYFGPDVKQVLVLAQQSIEQNTMSAKAEVAKTASCSTYPSPLYPDLNSYTN
LNFEADVTQFPKGTKGLEPTTPL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgctctctttacttggtccctcactcagcacagagatggttgagcctgggttcagggga
gtgctgttcttggtggtcctcctgcatttggtccatggagagagctacactcctattcat
gaagccaacaggtgtgccttctacgatgactgtgggaaaaaccccgagttgtccggcagt
ctcatcccactgtccaacgtgtcttgcttgtccaacactccagccgtacaagtgagtggg
atccatttgcagctcctgaatgatctctgcccacagctgtatcaaggaccaaactctact
tatgcctgctgttcctacaaacagctggtggctctggagagcagcttgaaggtgaccaaa
gccctcctcacccgctgcccagcctgtgcggagaactttgccagcttttattgccataac
acctgtagccccaaccaaagtgtcttcatcaatgtgacccgtatctctaacatttcaggg
accaactcctccaaggtgttggcctatgaggctttctacacccgcagctttgcagagcgg
gcctacgactcctgcagcaaggtgcaaatccctgccactggaggcttggctgtgggtgcc
atgtgtggggtatatggctccaacctctgtaatgcccagcgttggctcaattaccagggt
gacacggggaatggattagctcccttggaaatcacctttaatctcatggaccctggccag
gtcctagggaatgggatggagcccctggatgcagaaacatggggctgcaatgagactcgg
ggtaatagttccaatgcatgctcttgccaggactgtgccgcagcctgtcctgtgattgcc
catcctgccatgcaggattccactttccgcctggggagaatgcatggggggctggccatg
gccatcctcctctctgctgtctttgtttcattcttcactttccttgtggttcgctcttgt
tggaaaacaaaggccaagaagccccagcaaggtgtacgttgctctgatagatttagttat
tttgcccacgtcatcctgggcaaacttttccagagctggggcacatgggtggcctcacga
cccaagacagttttgtgtgtgtccacagtattggtaatgggactgtcaagtggactggtc
ttcctagaactgaccaccaatccagtggagttatggtctgctcccaatagccaggccagg
cgggaaaaggaattccatgaccgctattttgggcctttcttccgcaccaaccaggtgatc
ttgacagcttctaaccgatctagctatacctatgattccctccttctgggatctaagaac
ttcagcggcatcctgagcgaggacttgctccttcagcttctggagctgcaagaagaactg
aggcacatggaggtctggtccgaggaagaacagcgcaacatctctctgagagatatctgc
tatgcccctctcaaccccaacaatcccagcctgggggactgctgcatcaacagcttactg
cagtatttccaaagcaaccggaccaacttcctgctcactgccaaccagaccctgatgggg
cacaccgcccaggtggactggagagaccactatctctactgtgtcaattctcctctcaca
ttcaaggatggtacaaccttggctctgagctgcatggctgattatggggctccagtcttt
cccttccttgctgtgggaggttacacagggcaggatttttctggtgctgaggctctcctg
ctgactttctccctgaacaactaccctgctggggatccccgcttggctcaagctctgctc
tgggagagccgctttctggaggtgatgagagacttccagaagcgtacagcaggcaccttt
gaagtcactttcatggcagagcgatctctggaagatgagataaatcgcaccacaatggag
gacctgccggtctttgccaccagctatgccattgtcttcctgtacatttctctggctctg
ggtagatactccagccgatctcgcatactggtggactccaagataaccctgggcctaggc
ggggtcctagtagtgctgggatctgtcctctcctcaatgggcttcttctcctacctgggc
atcccctcttctatggtgatcatccaagtcgttcccttccttgtgcttgctgttggagct
gacaacatcttcatctttgttctagagtatcagaggttgccacggctctcagaggaacgc
cgggaggtacatattggacgagtcctgggcaccgtagctcccagcatgcttctttgtagt
ctctctgaggccatctgtttcttcttaggtgcactgacctctatgccagctgtgcgaacc
tttgctctgacagctggcttggccataatctttgacttcctgctgcagatgtcggccttt
gttgctttgctctccctggacaacaagaggcaagaggcctcacgcttggatttgtgctgc
tgtgctaaccccaggaaattgcctccccctccagagggtgaaagtttactacttcgcttc
tttcgaaagttttatgctcccttcttgcttcatggattcacccggattgttgtgcttggg
ctattcatggccctgtttggttggagcttgtatctcatgtgccagatcaatgtggggctg
gaccaggagttggcactacctgaggattcatatcttttggattacttcctcttcctgaac
cgttactttgaagttggagtgcccacttactttgtgaccacttctggctttaacttttca
agtttggatggcatgaattctatctgttccagttctggctgtgatgcatattcctttacc
cagaagattcagtatgccacagaatttcctaaagagtcttatctggctatcccagcttct
tcctgggtagatgacttcattgactggttgacacccacttctgattgctgtcgtctttac
agaaataacaccttttgtccttctacggaaaactctcctttggcctgttttcagaagtgc
gttccctataccctgagttctgtgcggcccacagtggagcagttccataagtacctgcct
tggtttttggaggacaagcccaatatcaaatgtcccaaagggggcctgggagcttatgat
gtttctgtgaacataagtgcagatggggagatattagccacccggtttatggcttaccat
acaccactcaagaattctcaagagtacacagcagccctgagggctgcccgggaactggca
gctaacatcacagctgacttgcggcgagttccagggactgatcctaagtttgaagtcttc
ccctacacggtcacatatgtattctatgaacagtacctgaccatcgtcccagaagggtta
ttcattctgggtctctgccttatacccacatttgctgtctcctgcctcctgcttgggatg
gacctccgatctggcttcctcaatctcttctccatcatcatgatccttgtggatactgta
ggcttcatgaccctgtggggcatcagctacaatgctgtgtccctcatcaatctcgtcacg
gctgtgggtatttcagtggagtttgtgtcccatatcactcgatcctttgccatcagtacc
aagcccactcggctggagagagccaaagagaccaccatcattatgggcagtgcggtattt
gctggagtggctatgaccaatctccctggcatcatcattctggccgctgctaaggcccaa
ctcatccagatcttcttctttcgcctcaaccttctcatcactgtctttggcatgctgcat
ggtctcatctttctgcctgtgattctcagctattttgggccagatgtcaaacaagtcctg
gtcttggcacaacagtcaatagaacagaacaccatgtcagccaaggcagaggttgccaag
actgcttcttgctcaacgtatccttctccattgtatcctgacttgaattcctataccaat
ttgaattttgaggctgatgtgactcagtttcccaagggcaccaaaggacttgagccaaca
acacctctttga
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