Gracilinanus agilis (agile gracile opossum): 123241778
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Entry
123241778 CDS
T07702
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123241778 (UPF3A)
03015 mRNA surveillance pathway
123241778 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123241778 (UPF3A)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123241778 (UPF3A)
mRNA cycle factors
P-body specific factors
123241778 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
123241778
NCBI-ProteinID:
XP_044525257
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All DBs
Position
3:complement(503226765..503254629)
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AA seq
519 aa
AA seq
DB search
MRSEKEAASGAGGSGVGGAGRGSGGKEKPLLPPPPPPPPPPLPPPPASSRGGTAMEIQFR
RESPRREVETPPTAVSASGCGGGGSKPREEKKTVLSKVVIRRLPPSLTKEQLEEQLHPLP
AHDYFEFCTADPSLYPHLYSRAYINFRNPDDILLFRDRFDGYVFIDSKGLEYPAVVEFAP
FQKISKKKLKKKDAKAGSIEEDPEYRKFLEAYCVEEEKISANPETLLGEIEAKTRELIAR
RTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERRKRKEAEKQK
KIAEKEIRIKLLKKPEKGEEPAIEKQKEKGEEADIEEGKWEKSSSSGSIKSKASESSLKE
LKEKSQNDSDKEQRDMDRRFREKEPERQRYRLDDGRKHRTHYEFDKFLRRNEDELKWGKG
YNQDRGKKGNHNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTRT
GSTSKTPDCTAKPSEETCDRKCEAEIPAGATSEKSEEAE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccgagaaggaggcagccagcggggccgggggttctggagtcggcggggctggg
cggggatcaggtggcaaagagaaacctctattgccgccgccacctccacctccgcctcca
cccctaccgcctccaccggcatcttcccgcggagggacggcgatggagatccagttccgc
cgcgagtcgcctcggcgcgaagtggagacgcccccgaccgcagtctcggcctcgggctgc
gggggcggcggcagcaagccgcgggaggagaagaaaacggtcctgagcaaggttgttatt
cgtcgacttcctccaagtctaaccaaggagcagctagaggaacagttacatccactccct
gctcatgattactttgaattttgtacagcggatcccagtctttatcctcatctttattca
agagcatatattaattttcgaaatcctgatgacatccttctttttagagaccgttttgat
ggctatgtcttcattgatagtaaagggctggaatatcctgctgtagtagaatttgctcca
ttccaaaagatttccaaaaagaaattaaagaaaaaagatgccaaagcagggagcattgaa
gaagatcctgaatatagaaagtttctagaagcctattgtgttgaggaggagaaaataagt
gccaatcctgaaactcttttgggagaaattgaggcaaagacacgagaactcattgctaga
agaacaacacctcttttggaatatattaaaaatagaaaattagaaaagcagagaattcga
gaagaaaaaagagaagaacgaagaagaagagaattagaaaagaaacgcttgagagaagaa
gagaaaagaaaacgtagagaagaggaaagacgtaagagaaaagaagctgaaaagcaaaag
aaaattgctgaaaaagagataagaatcaagcttcttaaaaaacctgaaaagggagaggaa
ccagcaatagaaaaacagaaagaaaaaggtgaggaagctgatattgaagaaggaaaatgg
gaaaaatcttccagctctggaagcataaaatccaaagcctcggaaagctcactgaaagaa
ctcaaggaaaagtcacaaaatgacagtgataaagaacaaagggatatggatagaagattt
cgagaaaaagaacctgaaagacaaaggtatcgcttggacgatggccgaaaacatagaact
cactatgagtttgacaagtttttgagaaggaacgaagatgaactgaaatggggaaaagga
tacaaccaagacagagggaagaaagggaaccacaactacagcttcactgtggaggcagta
gacaaacttggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataaga
aataaggaccgtccagccatgcagttataccaaccaggagctcgtattcgaacacgtacg
ggctctacaagtaaaactcctgactgcactgcaaagccctccgaagagacttgtgaccga
aaatgtgaggctgagattcctgctggagccacttctgagaagagtgaagaggcagaataa
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