Gracilinanus agilis (agile gracile opossum): 123242072
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Entry
123242072 CDS
T07702
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gas01002
]
123242072 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123242072 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123242072 (USP13)
Enzymes [BR:
gas01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123242072 (USP13)
Peptidases and inhibitors [BR:
gas01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123242072 (USP13)
Ubiquitin system [BR:
gas04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123242072 (USP13)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123242072 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
SUI1
UBA_4
UBA_3
DUF4304
Motif
Other DBs
NCBI-GeneID:
123242072
NCBI-ProteinID:
XP_044525498
LinkDB
All DBs
Position
3:679364868..679524518
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AA seq
946 aa
AA seq
DB search
MQRAALFGSPGGGPGGGSGPGPGPGPGKMAAGDLGELLVPYMPTIRVPRSGDRVYKAECA
FSYDSPISEGGLYVCMNTFLAFGREHVERHYRKTGQCVYMHLKRHVREKVTGASGGVLPK
RRNTKLFLDLEMNGDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLNS
KSPYRKQEPDSWENELQVSKHANNLMQLDNGVRIPPRYNLVERNSQGSLKREKDLSEESR
GLQKGRSSPTTAVDMVGDLSGYLEVAICIGEQGSDIMRLWKAFSPARGRQSSMMFVLDGV
LYSCSSLEFLLGYASHPDRTHQAPFRCQELHGIDWTGGIHYRLILPNLSWVLLAPQQNGI
SPCMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFVVEERIQCC
QSRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAETSRRPLPELVRARIPFSAC
LQAFSEPDNVEDFWSSALQAKSAVTEPPPQAPSIPDAPSPSARLLPPPPSTEEKELYRMS
AIQNLHSLDPFADANKGDDLLPAGTEDYVHVRIQQRNGRKTLTTVQGIADDYDKKKLVKA
FRKKFACNAIEHPEYGEVIQLQGDQHKNICQFLVEIGLAKDNQLKVHGVTHSCNKLKSAM
PSSLAAPHLKRVNGSSPFADVSIDMPDLLDINHLRATGLQPGEEELPDIAPPIVIPDDPK
DRLMNHYMEPPDIDESSVMQLAEMGFPLEACRKAVYYTGNMGPEVAFNWIIGHMEEPDFA
EPLSLPGFGGSATLGATAFGAIGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERA
LDWIFSHPELEEDNEFAAHMMEMENNANANIISESKPDGPRVKDGSGRYELFGFISHMGP
STMSGHYVCHIKKEGRWVIYNDHKVCASERPPKDLGYMYFYHRISS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgccctgttcggcagccctggcggcggccccggtggcggcagcggtccc
ggcccgggtcctggccccgggaagatggctgcaggagacctcggggagctgctggtccct
tacatgcccaccatccgcgtccccaggtccggggatcgcgtctacaaggcggagtgcgcc
ttctcttacgactccccgatttcagaaggaggtctctatgtgtgcatgaatacgttcctg
gcctttggaagggaacatgttgaaaggcactatcggaaaactggacagtgtgtgtacatg
catctgaaaagacacgtgagagagaaagtaacaggggcatctggtggcgtgttaccaaaa
aggaggaataccaagctattcttagatctagaaatgaatggagatttaaatagtgatgat
tatgaatatgaagacgaagccaagcttgttatatttccagaccactatgaaattgcattg
ccaaatattgaggagttacctgcactggtaacaattgcgtgtgatgctgtccttaactca
aaatctccgtataggaaacaggagccggattcctgggaaaatgaactgcaagtttccaaa
catgccaataacctcatgcaactggacaatggtgtcaggattcctcccaggtataatcta
gtggagagaaacagccagggcagccttaagcgggaaaaggacctatctgaagaaagcagg
gggcttcagaaggggaggagcagccccactactgccgtagacatggtgggagatttatca
ggctatttggaggtggctatttgcattggggagcaggggagtgacataatgagactttgg
aaggcattctcaccagccagggggagacagtcttccatgatgtttgtcctcgatggtgtc
ctttactcctgttcttctttggagttcctccttggttatgcatcgcaccctgatcgcacc
caccaggcacctttccgttgccaagaattacatggaatagactggactggtggtatccat
tacagattgatattacctaatctcagctgggtcctccttgcacctcagcagaatgggatc
tctccatgcatgttcaaggcctttgtcagcaagagccaccctgaattctcctccaacaga
cagcaggatgctcaggagtttttcttgcacctggtaaatctagtggagaggaaccgaatt
ggctctgaaaatccaagtgatgttttccggtttgtggtggaagaacgaattcaatgctgt
cagtccaggaaagttcgctacacggagagggtcgattatttgatgcagttgccggtggcc
atggaagcagcaacgaacaaggatgagctgattgcctacgagttgaccagaagagaagca
gagacatccaggagaccgctcccagaactggtccgggccaggattccttttagtgcctgc
cttcaggccttttctgaaccagataatgtggaagacttttggagcagcgccctacaggca
aagtctgctgtcactgagccgccccctcaagccccctcaattcccgacgctccgtccccc
tctgcccgccttctcccgccaccaccttccactgaggaaaaggaattgtatcgtatgtct
gctatccagaacctccattctttggacccctttgctgatgcaaataagggtgatgacctg
cttcctgctgggactgaggattatgtccatgtaagaattcaacagagaaatgggaggaag
accctcactactgtccaggggatcgctgatgattatgataaaaagaaactagtgaaggca
ttcaggaagaagtttgcctgcaatgcaattgagcatccagaatatggagaagtaattcag
ctacagggtgaccagcacaagaacatatgccagttcctcgttgagattggattggctaag
gacaaccagctgaaggttcatggcgtaactcattcgtgtaataaactgaaaagtgccatg
ccgtctagtcttgcagcccctcatttaaaaagagtaaatggctcctctccttttgcagat
gtctccattgatatgccagacctcctggatatcaaccatctcagagccacagggttacag
cccggagaggaagagcttccagatattgcccctccaatagtcattcctgatgaccccaaa
gatcgattgatgaaccattatatggaaccaccagacatcgatgagtcctctgtgatgcag
ttggcagagatgggtttccctttggaggcatgtcggaaggctgtgtactatactggaaac
atgggacctgaggtggccttcaactggatcattggccatatggaagagcctgattttgct
gaaccgctttccctgcctggttttggaggaagtgctactttgggggccactgcttttggt
gctattggattggataaccagcctccagaagaaattgtagccatcattacctccatgggt
ttccagaggaatcaggccattcaggcattaagggcaacgaataacaatttggagcgggcg
ctggattggattttcagccatcctgaactggaagaagataacgagtttgctgcccatatg
atggagatggagaacaatgccaatgctaacattatttcagagtccaagccagatggtccc
agagtgaaagatggatcaggaaggtatgagctatttgggttcatcagccacatgggaccg
tccaccatgagtggccattatgtttgtcatatcaaaaaggaaggcagatgggtgatctac
aatgaccataaagtctgtgcctcagaaaggccccccaaagacctgggctacatgtacttt
taccacaggatatcaagctag
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