Gracilinanus agilis (agile gracile opossum): 123246816
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Entry
123246816 CDS
T07702
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123246816 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123246816 (SMG6)
03032 DNA replication proteins [BR:
gas03032
]
123246816 (SMG6)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123246816 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
123246816 (SMG6)
DNA replication proteins [BR:
gas03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
123246816 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
123246816
NCBI-ProteinID:
XP_044531539
LinkDB
All DBs
Position
4:complement(490821032..491012284)
Genome browser
AA seq
1529 aa
AA seq
DB search
MPAGGSPRPAARLGIPCRVRSRASAQWATGGRGGGGFPVSSIREARRSPSGEEFRSPRFH
AHRKRAPRRDELNSPSRAVPATHAPRLPTPRFFALPELAPSLPCEPPYSRPDGRGRRRLG
VGQRAPPMVFEPVEACETRKKEENMKELKEPRQRKDNRRPDLEIYKPGLSRLRNKPKVKE
PSGSEEFRDEIANDRDTSALENGTQVIKDLCKVTDSQQQNGPADTERKEPFQGQESFPKT
SGQDDRGLRIIKRTKKPDLQIYQPGRRLQTIARDLAGRVEEAEVLSQVEQLRVEDNEPEK
DPRKDGAKAKSTRDEADKNQRAIRGDRGKRTEKGEGTKKVSDDGLQGKPGSAKRYSRSDK
RRNRYRTCSTSSAGSNNSAEGTGLADGGGRRRRQDRAKERPRLKKQVSMSSTDSLDEDRM
DEPDRLGPRRSSERRKPLDRSWACHGEGERRSEGKENRGGLRVTFDAETMNKDVPMARLS
KDDMERAKAEQGSGSMNRAPEKQESKTNQELRGRGRGILILPAHTALSVSTTGSPESTLL
GSKLLFGAGGKGSRSRGRGGTSRRLWDPNNPDQKPALKSQTPQLHFLDTDDEVSPTSWGD
SRQAQASYYKFQNSDNPYYYPRTPGPGPQYPYTGYGPLQYPLGPTNGVYPGAFYSGYPAP
SGQYVCGPLPASSLSTEEMEQQVRDLQHQELHRLLRVADNQELQLSNLLSRDRISPEGLE
KMTQLRAELVQLYERCLLLDIEFSDHQNVDQILWKSAFYQVIEKFRQLLKDPNAENPEQI
RNRLLELLDEGTVFFDSLLQKLQVTYQFKLEDYMDGLAIRSKPLRKMVKYALISAQRCMI
CQGDISRYREQANDTTNYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYM
RSLAASNPILTAKESLMSLFEETKRKAEQMEKKQQEELELSPNRWRKGRRSTFRHVADDT
TRLEIWIHPSHSRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRIGME
TFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQ
ATALGLAMFSLLVRRCTYLLKESAKAHLSSPEDEEDQDDIKVSAFLPDLKELLPSVKVWS
DWMLGYPDTWNPPPTSLDLPTQVAMDVWATLADFCNILTAVNQSEVPLYKDPDDDLTLLI
LEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKG
GKYVSVAPVPDTMGKEMGSQEGKQLEDQEEDVVIEDFEEDSEAEGSGGEYDIRELRAKKM
ALARKIAEQQRRQEKIQAVLEDQTQMRQMELEIRPLFLVPDTNGFIDHLASLARLLESRK
YILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDSCLRALTS
RGNELESIAFRSEDITGQQGNNDDLILSCCLHYCKDKAKDFMPPNKDEPIRLLREVVLLT
DDRNLRVKALTRNVPVRDISAFLKWAQVG
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgggtgggagcccacggcctgcggccaggctcggaatcccatgcagggtgaga
tctcgggcatctgcccaatgggctacagggggaaggggtgggggaggtttcccagtctct
tccattcgagaggctcgtcgaagccctagcggggaagaattcagatcccccaggttccac
gcgcacagaaagcgagctcctcggcgggatgaactgaactcaccttcccgggccgtccca
gccacgcatgcgcctcgcctccccactccgcgttttttcgccctcccggagctcgcgcct
tctctcccttgcgagccgccgtacagccgtccggatgggaggggaaggcggaggctgggt
gtggggcagcgcgcgccgcccatggtatttgaacctgtggaagcctgtgaaaccaggaag
aaagaggaaaacatgaaggagttgaaggagcccaggcagcgtaaagataacaggcgccca
gatctggaaatctataagcctggtctttcccgactgaggaacaaacccaaagtcaaggag
ccttcaggtagtgaagaattcagggatgaaattgccaatgacagagacacctctgctctg
gaaaatggtacacaggtcattaaagatctctgcaaggtgactgacagccaacagcaaaat
ggccctgcagatacagaaaggaaagaacccttccagggacaggaatcttttcctaaaacc
tccggacaagatgatcggggtctcagaattattaagagaacaaagaaacctgatttacag
atctatcaacctggaagacgcttacagactattgctagagacctggctggccgagtagaa
gaggccgaggttctcagtcaggtagagcagctcagagttgaggacaatgagcctgaaaag
gacccaaggaaagatggtgccaaggccaagtccaccagagatgaggccgacaagaaccag
agggccatcaggggagacagggggaagaggactgaaaagggggaagggacaaagaaagtc
agcgacgatgggctccagggcaagcccggctcagccaagcgctactcacggtccgacaag
cgtaggaatcgttatcgcacttgtagcaccagctcggcggggagcaataacagtgccgag
gggacggggctggctgatggtggagggcggcgccgtcgtcaggatcgggccaaggagagg
cctcgtctcaagaagcaggtgtctatgtcttccactgactccctggatgaagatagaatg
gatgaacctgaccgcctggggccccggaggagctcggagaggaggaagcctttggacaga
agttgggcttgtcatggggagggtgagcggagaagcgaagggaaggagaacagaggtggc
cttcgagtcacctttgatgcagagaccatgaacaaagatgtgcccatggcaagactaagt
aaggacgatatggagagagccaaagctgagcagggttcaggcagcatgaacagggctcct
gaaaagcaggagtccaaaacaaaccaggaactgcggggccgtggccgtggcattctgatc
ttgcctgcccacacagcactctcagtcagtacgacgggatcaccagaatccacccttttg
ggatcaaagcttctctttggagccggcggtaaggggtcccggagtcggggccggggaggc
acgtcccggcggctgtgggacccgaacaatcctgaccagaaacctgctctcaagagccag
acccctcagcttcacttcctggatactgatgacgaagtcagccccacttcttggggggac
tcccgccaggctcaggcatcttactacaagttccaaaactctgataacccttactattat
cccaggacaccgggccctggacctcagtatccctacacaggctatggcccactgcagtat
cccttaggccctacaaatggcgtgtatcctggggctttctactctggctaccctgctcca
tctgggcagtatgtctgtgggcctctccctgccagctccttgagtacggaagagatggag
cagcaggtgagggacctgcagcatcaagaactccatcggcttcttcgggtggctgacaac
caggagttgcagctcagcaacctgctctccagagaccggatcagccctgagggcttggag
aagatgacccagctcagagcggagctggtacaactttatgagcgttgtctcttattggac
atcgagttctctgatcaccagaatgtggaccagatcctgtggaagagtgctttctaccag
gtcattgagaagttcagacagctgcttaaggatccaaatgctgagaacccagagcagatt
cggaacaggctgctggaactcctggacgagggcactgtcttctttgatagtctgcttcag
aaactgcaggttacataccagtttaagctggaggactacatggatggtttggccattcgc
agcaaaccattaaggaaaatggtgaagtatgccttaatcagtgcccagcggtgtatgatt
tgccaaggagacatttccaggtaccgggaacaagccaatgacacaacaaactatgggaaa
gcacgaagctggtacttgaaggctcagcacattgctcccaagaatggccgtccttataat
cagttggcgttgttagcggtgtatacgaggaggaagctcgatgctgtgtactattacatg
cgcagtttagctgccagcaaccctatccttacagcgaaggagagcctcatgagcttgttt
gaagagaccaagcgaaaggctgagcagatggagaaaaagcagcaagaggagctggagcta
agtcctaaccgatggaggaaaggcaggagatccactttccggcatgttgctgatgacacg
acccgcctggagatttggatccacccctcccactcccgatcttcccagggcaccgagtcg
gggaaggactccgagcaggagaatggcctcggcagcctgagccccagcgatctgaataaa
aggttcatcctcagttttctccatgcccatgggaagctgtttacccggattgggatggag
acattccctgctgtggctgaaaaggtcctgaaggagttccaagtgttgctgcagcatagc
ccctctcctattggaagcacccgcatgctgcagcttatgactatcaacatgtttgctgta
cacaactcccagctcaaagattgtttctcagaggaatgccgttctgtgatccaggaacaa
gctactgctctgggattggccatgttctccctgctggtgaggcgctgcacctacttgcta
aaagaatctgccaaagctcacctatcttcccctgaggacgaggaagaccaggatgatatc
aaggtgtcagccttcctcccagacctgaaagagctactgcccagtgtgaaagtttggtca
gactggatgcttggttatccggatacgtggaaccctccacccacatctcttgatctgccc
acacaggtcgccatggacgtgtgggcgacactagccgatttctgtaacatactgacagca
gtgaatcagtcggaggtaccattgtacaaggacccggacgatgacctcacccttcttatc
ctggaagaggatcggctcctctcgggcttcgtccccctgctggctgccccccaagacccc
tgctacgtggagaaaacctcggacaaggttattgcagccgactgcaagagggtcacagtg
ctaaagtatttcctggaagccctttgtggacaagaagagcctctgctggcattcaagggt
ggaaaatatgtgtcagtggcgcccgtcccagacaccatgggaaaggaaatgggaagccaa
gagggaaaacaactggaagatcaggaggaggatgtagtcattgaagattttgaggaagat
tctgaggctgaaggcagtgggggcgaatatgacatcagggagcttcgggccaagaagatg
gctctagccaggaagatagccgaacagcaacgtcgccaagaaaagattcaggctgtcctg
gaggaccagactcagatgcggcagatggagctagagatcagacccctgttcctcgtacca
gacaccaacggcttcatcgaccacctggccagcctggcacggctgctggagagcaggaag
tacatcctcgtggtgcccctcatcgtgattaacgagctggatggcctggccaaggggcaa
gagacagaccatcgggctgggggctacgcccgagtggtccaggagaaggcccgaaagtcc
atcgagttcctcgagaggcgatttgagagccgggactcttgcctacgagccctgaccagc
cgtggcaacgaacttgagtccattgccttccgaagtgaggacatcactggccaacaggga
aataacgatgacttgatcctctcctgctgccttcactactgtaaagacaaggccaaggac
ttcatgccccccaacaaagatgagcccatccggcttctgcgggaggtggtgctgctgaca
gacgacagaaacctgcgggtgaaggcgctcaccagaaacgtgcccgtgcgggacatctcg
gccttcctcaagtgggcgcaggtggggtga
DBGET
integrated database retrieval system
