Gracilinanus agilis (agile gracile opossum): 123248468
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Entry
123248468 CDS
T07702
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123248468 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123248468 (TRIM71)
04121 Ubiquitin system [BR:
gas04121
]
123248468 (TRIM71)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123248468 (TRIM71)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123248468 (TRIM71)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123248468 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
DUF4094
YlbD_coat
COG5_N
Motif
Other DBs
NCBI-GeneID:
123248468
NCBI-ProteinID:
XP_044533185
LinkDB
All DBs
Position
5:22438067..22447792
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AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVTSRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTISAVQQVL
EEGRAMDILLARDRMLAQVQELKNVRSLLKPQEDDRVMFTPPDQALYLAIKSLGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVLVKSGRSYVGIGLPVLAFGSEGDN
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFYHKFGTLGSRPGQFDRPAGVACD
ASRRIVVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNH
RVQLFGPDGAFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFICKFGAQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccacgtcgggcacagcttcatctacctccaggatgccctgcaagactctcgc
accctcaccatccagctgctggccgacgcacagcagggccgtcaggccattcagctgagc
atcgaacaagcccaggcggtggcggagcaagtggagatgaaggcgaaggtggtccagtcc
gaagtgaaggcggtcacgtccaggcacaagaaggccctggaggagcgggaatgtgagctg
ctgtggaaggtggagaagatccggcaggtcaaggccaagtctctgtacctgcaggtggag
aagcttcggcagaacctcaacaagctggacagcaccatcagcgcggtgcagcaggtcctg
gaggagggccgcgccatggacatcctgctggcccgagaccgcatgctggctcaggtgcag
gagctcaagaacgtgcggagcctcctgaagccgcaggaggacgaccgagtcatgttcacg
ccacccgaccaggccctctacctggccatcaagtcgctgggcttcgtcagcagcggggcc
ttcgcccccttgaccaaggccaccggggaaggcctgaagcgcgccctccagggcaaggtg
gcctcgttcaccgtcatcggctacgaccacgacggggagccgcggctttcggggggggac
ctgatgtccgccgtggtcatggggccagacgggaatctattcggcgcagacgtcagcgac
cagcagaacgggacgtacctggtcagctaccggccgcagctggaaggcgagcaccttgtc
tctgtcatgatgtgcaaccagcacatcgagaacagccctttcaaggtgctggtcaagtcc
ggccgcagctacgtggggatcggcctgcccgtcctggccttcggcagcgagggcgacaac
gacgggaagctgtgccgtccgtggggagtcagcgtggacaaggagggatacatcatcgtg
gctgaccgcagcaacaaccgcatccaggtgttcaagccctgcggcaccttctatcacaag
ttcggcactctgggctcgaggcccggccagttcgaccggcccgcgggggtggcttgtgac
gcgtcccggaggattgtggtggccgacaaggacaatcatcgcatccagatcttcaccttc
gatgggcagttcctcctcaagtttggcgagaaaggcaccaagaacgggcagttcaactac
ccttgggatgtggcggtgaattcggaaggcaagattctggtgtctgatacccggaaccac
cgggtccagctgttcgggcccgatggggccttcctcaacaagtacggcttcgaaggggcc
ctctggaagcactttgattccccccggggcgtgaccttcaatcatgagggccatctggtg
gtgacggacttcaacaaccaccgtctgctggtcatccacccagactgccagtctgcacgc
ttcctggggtcggagggcaccagcaacgggcagttcctgcgtcctcagggggttgcggtg
gaccaggaaggacgcatcatcgtggccgattccaggaatcatcgtgtgcagatatttgaa
tccaatggcagcttcatatgcaaatttggtgctcagggaagtggctttggccaaatggac
cgtccctctggcattgccgtcactccagatggcatgattgtcgtggtcgattttggaaac
aatcggatcctcatcttttaa
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