Gracilinanus agilis (agile gracile opossum): 123250443
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Entry
123250443 CDS
T07702
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas02010
ABC transporters
gas04976
Bile secretion
gas05206
MicroRNAs in cancer
gas05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123250443 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
123250443 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123250443 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
123250443 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gas02000
]
123250443 (ABCB1)
04147 Exosome [BR:
gas04147
]
123250443 (ABCB1)
04090 CD molecules [BR:
gas04090
]
123250443 (ABCB1)
Enzymes [BR:
gas01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123250443 (ABCB1)
Transporters [BR:
gas02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123250443 (ABCB1)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123250443 (ABCB1)
CD molecules [BR:
gas04090
]
Proteins
123250443 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
RsgA_GTPase
Rad17
AAA_5
AAA
AAA_30
AAA_28
AAA_29
AAA_18
G-alpha
DUF815
PRK
AAA_7
nSTAND1
AAA_14
AAA_15
APS_kinase
NB-ARC
AAA_19
DUF2207_C
NTPase_1
Motif
Other DBs
NCBI-GeneID:
123250443
NCBI-ProteinID:
XP_044535441
LinkDB
All DBs
Position
5:54770844..54848159
Genome browser
AA seq
1184 aa
AA seq
DB search
MTTYAYYYSGVGAGVLIAAYIQVSFWTLAAGRQIKKIRQNFFHSIMRQEIGWFDVHDVGE
LNTRLTDDVSKINDGIGDKIGMLFQALATFFTGFIVGFTRGWKLTLVILAVSPVLGLSAA
LWAKILSSFTDRELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKNIGIK
KAITANISIGAAFLLIYASYALAFWYGTTLILSEEYTIGNVLTVFFSVLIGAFSIGQASP
SIEAFANARGAAYEVFKIIDNNPAIDSYSESGHKPDNIKGNLEFKNVHFTYPSRKEVKIL
KGLSLKVNSGQTVALVGNSGCGKSTTVQLIQRLYDPTEGMVTIDGQDIRTLNVRYLREIT
GVVSQEPVLFATTIAENIRYGRQDVTMEEIEKAVKEANAYDFIMKLPYKFDTLVGERGAQ
LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLS
TVRNADVIAGFEDGVIVEQGNHNELMKQKGVYFKLVTMQTGGNQIELEDATYELIEEISA
SEPVTKGSGSSIRRRRSTRSSIKKPQASEKKVTGEEKKLDENVPPVSFFRILKMNKTEWP
YFVVGTFCAIVNGVLQPAFSIIFSRIIGVFVKPEDPETKRRNSDLFSLLFLVVGIISFIT
FFLQGFTFGKAGEILTKKLRYQAFKSMLRQDVSWFDDPKNSTGALTTRLATDASQVKGAT
GARLAIIAQNIANLGTGIVISLIYGWQLTLLLLAIVPIIAVAGVIEMKMLSGHAQKDKKE
LEGAGKIATEAIENFRTVVSLTQEKKFETMYQQSLQGPYRNSMKKAHIFGITFSVTQAIM
YFSYAACFRFGAYLVANRHMDFQDVLLVFSAIVFGAMAVGQTSSFAPDYAKAKISAAHVI
HLIEKKPLIDSYSEEGQKPDKFEGNVSFNEVVFNYPTRPDVPVLQGLSVEVKKGQTLALV
GSSGCGKSTVVQLLERFYDPLGGKVVSVLVDELYFCFQTVDDRDVKALNVQWLRAQLGIV
SQEPILFDCSIAENIAYGNNSRVVSQEEIENAAKAANIHPFIETLPKKYETRVGDKGTQL
SGGQKQRIAIARALIRHPQILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLST
IQNADLIVVFQNGKVKEQGTHQQLLAQKGIYFSLVNVQTGAKRM
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtatgcatattattacagtggagtgggtgctggggtgctcattgctgcctac
attcaagtttcattttggaccttagctgctggacgacaaattaagaaaattagacaaaac
tttttccattcaataatgcgccaggaaatcggttggtttgatgtccatgacgttggggag
ctgaacactcgactcactgatgatgtctccaaaattaacgatggaattggagacaaaatt
ggaatgctctttcaagcactagcaacattcttcacaggttttatagttggatttacaaga
ggctggaagctaacacttgtgattctggctgttagtcctgtcctaggcctgtcagctgcc
ctctgggcaaagatactgtcatcctttactgatagagaacttttagcatatgcaaaagct
ggagcagtagctgaagaggtcctagcagcaattagaactgtaattgcttttggaggacaa
aagaaagagcttgaaaggtacaacaaaaatttagaagaagctaaaaatattgggataaag
aaagctattacagccaacatttcaataggggctgccttcctactgatttatgcctcatat
gcattggcattctggtatggaaccactttgattctctctgaagaatacactattggaaat
gtactcactgtcttcttttctgtattaattggagccttcagtattggacaggcatcacca
agcattgaagcttttgctaatgcaagaggtgcagcctatgaagttttcaagatcattgat
aataatccagctattgatagctattcagagagtggccacaaaccagataatattaaagga
aacctggagttcaaaaatgttcatttcacttacccatctcggaaagaggttaagattttg
aagggcctcagtctcaaggttaacagtggacaaaccgtagccttggttggtaacagtggc
tgtgggaaaagtacaaccgttcagttgatacagagattatatgatcccacagagggtatg
gtaaccattgatggacaagatatccggaccctaaatgtaaggtatctgagggaaattact
ggggttgtgagtcaagagccagtactctttgcaaccacaattgctgaaaatattcgctat
ggccgtcaagatgtcaccatggaagagattgagaaagctgtcaaagaggccaatgcctat
gactttatcatgaaacttccttataaatttgacactctggttggagaaagaggagctcag
ttgagtggagggcagaagcagagaatagcaatcgctcgagctttggttcggaatcccaag
attcttctgcttgatgaagcaacatcagccttagacactgaaagtgaagcagttgtacag
gtggcgttggataaggcaagagagggtcgtaccactattgtgatagcccatcgtttgtct
acagtccgtaatgcagatgtcatagctggtttcgaggatggagttattgtggagcaagga
aatcacaatgaattaatgaagcagaaaggagtttacttcaaacttgtaaccatgcagaca
ggaggaaatcagattgaattggaggatgctacttatgaactgatagaagaaataagtgcc
tcagaaccagttacaaaaggttcaggatccagtatccgaagaagacggtcaactcgctca
agtatcaagaagccacaggcatcagagaaaaaagttactggagaggagaagaagcttgat
gaaaatgtgcctccagtttcttttttcagaattttgaagatgaataagacagaatggcct
tattttgtggttggcactttttgtgccattgtcaatggagttctacaaccagcattttct
ataatattttccaggattattggggtctttgtaaaaccagaagatcctgaaacaaaaagg
cgtaatagtgatctgttttcactgttgtttctagtagtaggaattatttctttcattact
tttttccttcagggcttcacatttggcaaagctggagagatccttacaaagaagctccgc
tatcaggcctttaaatcaatgctgagacaggacgtaagctggtttgatgatcctaaaaat
agcactggtgctctgaccacaagacttgccactgatgcctcccaagtcaagggggccact
ggtgccagattggctattattgcccagaatatagccaaccttgggacaggaattgtcatc
tcattgatctatggctggcagttaacacttctgctcttagcaattgtgcctatcattgca
gtggcaggagtaattgaaatgaaaatgttgtctggacacgcccagaaagataagaaagaa
ttagagggtgctggcaagatcgctactgaagcaatagaaaatttccgaactgttgtttct
ctgacgcaggagaaaaagtttgagactatgtaccagcagagcttacagggcccatacaga
aattctatgaagaaagcacatatcttcggcatcactttttctgtcacccaagcaataatg
tatttttcctatgctgcttgtttccggtttggtgcctacttggtggcaaatagacatatg
gattttcaagatgtgctcttggtattttcagccatcgtatttggtgccatggcagtggga
cagacaagttcatttgcaccagattatgccaaagccaaaatatcagcagcccatgtcatc
catctcatagaaaaaaaacccttgatagacagctacagtgaagagggacaaaagccggac
aagtttgaagggaatgtgtcatttaatgaagttgtgttcaactaccctacccggcctgac
gtccccgtgcttcaaggcctgagcgtggaggtgaagaagggtcagacactggctctcgtg
ggcagcagtggttgtgggaagagtactgtagtgcaactccttgagagattctatgatccc
ctgggtggaaaagtggtaagtgtgcttgttgatgaattgtacttttgctttcagacagtt
gatgacagagatgtcaaagcactcaatgtgcagtggctccgggctcagcttggcatcgtg
tcccaggagcccatcttgtttgactgcagcattgctgagaacatcgcctatggaaacaac
agccgggtggtgtcacaggaggagatcgagaatgcggccaaggctgccaatatacatcct
ttcatagaaacactacccaaaaaatatgaaaccagagtgggagacaaagggactcagctc
tcagggggtcagaaacagcgcatcgctattgctcgagccctcatcagacatcctcagatc
ctgctgttggatgaagcaacatcagccctggatacagaaagtgaaaaggttgtccaagaa
gccctggacaaggccagagaaggtcgcacgtgtattgtgatcgcccaccggctctccacg
atccagaatgctgacctcattgtggtattccagaatggcaaggtcaaggaacaagggaca
caccaacaactactggctcagaaaggaatctatttttcactggtcaatgttcagactggg
gcaaagcgcatgtga
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integrated database retrieval system
