Gracilinanus agilis (agile gracile opossum): 123250806
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Entry
123250806 CDS
T07702
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123250806 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123250806 (DMXL1)
Membrane trafficking [BR:
gas04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123250806 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
123250806 (DMXL1)
RAVE complex
123250806 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Motif
Other DBs
NCBI-GeneID:
123250806
NCBI-ProteinID:
XP_044535937
LinkDB
All DBs
Position
1:277456881..277655851
Genome browser
AA seq
3033 aa
AA seq
DB search
MSRGPQRSGFSSARPPPPPPKQAYASGCDIVILGSNFERLQIIPGAKHGNIQVGCVDCSM
EQGKIAASYGNIICVFEPVNLLKQKNTPNVELYNQWQKSGQFFLESIAHNITWDPTGSRL
LTGSNCLQLWSNNNVEKQSEDENPEKADLNFGDWRCIWHCRTASQVHLMKFSPDGEFFAT
AGKNDCLLKVWYSTDNWRSTVISQDRGPEKQTQGGEVDFSFVYLAHPRAVNGFSWRKTSK
YMPRASVCNVLLTCCKDNVCRLWVETFLPNDSLLYEGNYNHWADPNLTNNFKRNPSSKER
VQNALEVNLRHFRKGRRRSLALVAHTGYLPHQQNPHQVHRNTPLQGNALCHFHIAASINP
ATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQPPSDVS
VEESNQMDGKSDEETDDGGDDLKVIPEKRELSSEKNILSSGCVPLPSAIIDHQIEVLLSE
WSKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCRS
IVMYACTKNVDLAIQQGKQKPSGLTRSTSMLISSGHSKSTNSLKLSIFTPNVMMISKHAD
GSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALRTPD
TDNLKQSYDALNSEETLLGEHSRSSVDRTFQDPNAVYSELILWRVDPVGPLSFSGGVSEL
ARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVTDAKKLLYE
LSNPEISKYVGEVFNIVSQQSTARPGCIIELDPITELRGRKTQLLHVFQEDFILNSLEKK
SLGKGSILSDSGNQSNGFSEKFYLVVIEFTQDNCSLLHMWNLHLKSIPVSIDEKIDASVS
GAVLQQEELYSSSPERIQSPFSKKFQACRANLQSTSKLTLSSKMVYSQELNLPEGVEIIS
VKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTTVETATSENTAESDLEYIWE
EWPLLIEDGLPSSSVVTIPGRPIEVSCAHTNRLAVAYKQPASNGRSSQDFMMHVSIFECE
STGGSFWILEQTIHLEELSAMLDSGISIDSNLVAYDKQDVYLSNKENIMPSTKHLVHLDW
MSREDGSHILTVGIGSKLFMYGQLAGRVQEQTGKEGLAFPLWENTKVLSQSRFVLLRCVD
LVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPPSKQELVITDSYDGSTPSIIS
LTKPGNSAGSGLHPPKKTLTRSMTSLAQKICGKKTAFDLDMDMEDSGLFEAAHALSPTLP
QYHPLQLIELMDLGKVRRAKAILSHLVKCIAGEVVALNETVSNPERRFRSLTISASGSTT
RDPAAFNKTENTDYTEIDSVPPLPLYALLAADDDSPYSSEKSSNCNYLNKISQLHDESYN
ELFQISALTTDEIHVFEAEEENTKPKVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPGLNR
MEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPPVYRA
QLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRVLRKCI
EKVAKAAFYRKNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFADDRWRKAAL
KNAFSLLGKQRFEHSAAFFLLAGCLKDAVEVCLEKLNDVQLALVIARLYESEFDTSATYK
SILHKKVLGIDSSVREHSSMNMNTHDDPFLRSMTYWILEDYSKALDTLIKQPIKEEEDQA
IASSTCNPAVFNFYNYLRTHPLLLRRHFGSSDASSTQICLTGENGLAGKINLSERRLFFT
TAHAHLKAGCPMLALEVLSKMPKVIKKTKLFYRTCSFLDTSQDYSPSSPLRLDTKDSKSS
SIDWSQSGVNGLKSSSDGLSDEQSNSTLSFDWSQPSVVFQDESLDLKWDSDNDEENEDTP
LSMKELKTSQIKMDKKINETNSSYTDSFSIDENDTLSPSEDIIAVQLKFRACLKILTVEL
RTLSTGYEIDGGKLRYQLYHWLEKEVVALQKACDYCSDVEDAHCVFSESVDEAILNENTK
DLSDQPKINQLRQNFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQES
QQETLEPISPLPEQTSIPLLFACTASAKTVVANPLLHLSNLTHDVLHAIINLDSPPHPDT
QNNKVYIMHTLAASLSACIYQCLCGGHNYSSLQTNQFTGMVYQTLLFPHRHSLKTTSLDE
TITPNTSPAQWPGITALIRLLNSAGEEAQSGLTVLLCEILTAVYLSLFIHGLATHSSNVL
FRIVAHPLNEKMWSAVFGGGAHIPNKEQTASKAVTGRYFSMPSPHQVVVFSMECVGFSKA
LTAISSHNTTSLSVSSSVEDGEKQHRRSRTSKIASKECPLQNSSSPAGDQESLIYKEKFI
PPELSIWDYFIAKPFLPPSQSRAEYDSEESQESGDDEDEDGDDEDVLTSDYQLQEHANSN
SYSWSLMRLAMVQLVLHNLKTFYPLAGHDLSELPVSSPLCHAVLKALQCWEQVLLRRLEI
HGGPPQNYMASHTSEESLSAGPAILRHKALLEPTNTPFKSKHHLALSVKRLWQYLVKQEE
IQETFIRNIFTKKRCLNEIEAELGYPGGKARIIHKESDIITAFAVNRANRNCIAIASSHD
IQELDVSGILATQIYTWVDDEIELETKGSDDFLVIHARDDLASVQGTTPYTHSNPGTPIN
MPWLGSTQTGRGASVEYANKFNGIRKELARKEMIKKTINNVRRMASHPTLPYYLTGAQDG
SVRMFEWGHSQQITCFRSGGNSRVTRMRFNHQGNKFGIVDADGYISLYQTNWKCCPVTGN
TPKPYLTWQCHNKTANDFVFISSSSLIATAGLSTDNRNICLWDTLVAPANSLVHAFTCHD
SGATVLAYAPKHQVLISGGRKGFTCVFDLRQRQQRQFFQSHDSPVKAIAVDPTEEYFVTG
SAEGNIKLTVFWPLLLEKDFDELESKKIRQPGW
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgggccccagcgaagcggcttcagctctgcgcgcccgccgcctccgccgcca
aagcaggcttatgcttctggatgtgatattgtaatactgggaagtaactttgaaaggttg
cagataatccccggagctaagcatgggaacattcaagtgggatgtgttgattgttcaatg
gagcaagggaagattgcagcatcatatggaaacattatttgtgtttttgaaccagttaac
ctactaaagcaaaagaacactcctaatgtggaattatataatcaatggcagaaaagtggc
caattttttctggagtccatagcacacaatattacttgggaccctacaggcagtcgtctc
ttaactggttctaactgtttgcaactttggtctaataataacgtggagaagcaatctgaa
gatgaaaatcctgaaaaagcagatcttaattttggggattggcgatgtatttggcactgt
agaactgcttcccaagttcatttaatgaagttttcacctgatggagaattttttgctact
gcaggaaagaatgactgccttttgaaagtgtggtatagtacagacaactggcgatcaaca
gttatctctcaagatagaggtccagaaaagcaaacacaaggaggagaggttgacttttca
tttgtttacctggcacatcctagagctgtaaatggattttcctggcggaagaccagcaaa
tatatgcctagggcttctgtttgtaatgtattattgacttgctgcaaagataatgtgtgc
cggctatgggtagagacttttttaccaaatgatagtctcttatatgaaggaaactataac
cactgggctgacccaaatttaacaaataacttcaagaggaatccttccagtaaggaacga
gttcaaaatgctttggaagtaaacctgaggcattttcgtaaaggaagaaggagatcactt
gcacttgtagcacatactggctacctaccacatcagcagaatcctcatcaggtccatagg
aatactcctctgcaaggcaatgcactttgccactttcatattgctgccagcatcaaccca
gccacagacattcctttacttccttctattacatctctcagtcttggtgaaaatgaagaa
aagagtgggccttttgttgtacactggctcaacaataaagaattgcattttactttatcc
atggaagtctttttacagcagcttcgaaagagttttgaacaaccaccttcagatgtcagt
gtggaagaatctaatcagatggatggaaaatctgatgaagaaacagatgatggtggtgat
gatctgaaagtaattcctgaaaagagggagttgagtagtgagaaaaatatactcagttca
ggctgtgtccccttaccatctgctattattgatcatcagattgaagtgcttctgtctgaa
tggagtaaaaatgctgacatgcttttcagtattcatcccgtggatggttctttgctggtt
tggcatgtggattggctggatgaataccagcctggtatgtttcgccaggtgcaggtatca
tttgtttccagaattccagtagctttccctacgggtgatgcaaattctctgtgcagaagc
atagtgatgtatgcttgtactaagaacgttgacctagctattcagcaaggcaaacaaaaa
ccctctggcctcacacgttctacatcgatgctcatctcttctggtcacagtaaatcaact
aatagtttaaaattaagtatctttactcctaatgtaatgatgatttcaaagcatgcagat
ggatctttgaaccagtggttagtcagctttgcagaggaatctgctttttctacagtgctc
agtatttcccataaatctagatattgtggtcatcgctttcaccttaatgacttagcttgc
cattcagtattaccattgctactaacaacatcccatcataatgcattacggacaccagac
actgacaatctgaaacaatcttatgatgctttaaactctgaggaaactttattaggagaa
catagtagaagttctgtagatagaacattccaggatccaaacgcagtttatagtgaactt
attctttggagggttgatccagttgggccattgtctttttctggaggtgtttcagaactt
gcaaggattaattctcttcatgtttcggccttttccaatgtggcatggctacctaccctc
atacctagttactgtctaggtgcttattgcaactctcctagtgcttgctttgtggcaagt
gatggacaatatttgagattatacgaagccgtcactgatgccaaaaaacttttatatgag
ttatccaaccctgaaatttctaaatatgttggcgaggtgtttaacattgtgagtcaacaa
tcaacagcaagaccaggatgcattattgaattagatcccattactgaacttcgtggcaga
aaaacacagctacttcatgtttttcaagaagacttcattttgaacagcctggagaagaaa
agtctgggaaagggcagcattttatctgattctggtaaccaatctaatgggttttctgaa
aaattctacttagttgtaatagagtttactcaagacaactgctcattacttcatatgtgg
aatttgcacttaaaatccattcctgtctcaattgatgagaaaatagatgcaagtgtgtct
ggggcagtgttgcaacaagaagagttatattcttcttctccagaaaggattcaatctcct
ttttcaaagaaatttcaagcttgcagagcaaatcttcaaagtactagtaaattgactctt
tcttcgaaaatggtatatagccaagaactgaatttaccagaaggcgttgagataatcagt
gttaagccatcagcaggacatctaagttcctcttccatatatccagtatgtagtgcaccc
tatttattggcaacttcgtgttcagatgaaaaagtgagattctggaggtgcagagtaacc
actgtagagactgccacatcggagaatactgcagaaagtgatcttgagtacatttgggaa
gaatggcctttactcattgaggatggccttccaagtagcagtgttgtaaccattcctggc
agaccaatagaagttagttgtgctcacacaaatcgtttagctgtggcctataagcaacct
gcatctaatggtagatcttctcaagattttatgatgcatgtaagtatttttgaatgtgag
tctacaggaggttcattttggatccttgaacagacaattcatttagaagaattaagtgca
atgttggattctggtattagtatcgatagcaatttagtggcctacgataagcaagatgtt
tatttatctaataaagaaaatatcatgccatccaccaagcacttagttcacttagactgg
atgtctagagaagatggttctcatatacttactgtaggaattggatcaaagctctttatg
tatggacaactggctggcagagttcaggaacaaactggtaaagaaggcttggcatttcca
ctgtgggagaatactaaagttttgtctcagtctaggtttgttttacttcggtgtgtcgat
ttggtttcttcagtagaaggatcaccaccttttcctgtttctttatcttgggtacgtgat
ggcatccttgtggtaggaatggactgtgaaatgcatgtttattcccagtggcaaccgcct
tccaaacaagagctggtgatcacagattcatatgatggaagcactccttctatcataagt
ttaacaaaaccaggtaattcagcagggtctggtttacacccaccaaagaaaacattaact
agatccatgaccagtcttgcacagaaaatttgtggaaagaaaactgcatttgatcttgat
atggacatggaagattcaggtctttttgaagcagctcatgcactctcaccaactttacct
cagtatcatcctttgcagcttatagaactcatggatcttggtaaagtgcgtagggctaag
gccattttatcccatcttgttaaatgcattgcaggagaagttgtggctttgaatgaaact
gtttccaatcctgaacgtcgattcagatctcttaccattagtgcaagcgggagtaccaca
agagaccctgcagcattcaataaaactgaaaatacagactatacagaaatcgattcagta
ccccccctccctttatatgccttacttgctgcagatgatgatagcccttattcttcagaa
aaatctagtaattgtaattatttaaacaaaataagccagttacatgatgaaagttacaat
gagctttttcagatatcggcactaactactgatgaaattcatgtgtttgaggcagaagaa
gaaaatacaaagcccaaggttattgatctttctcaatacagtccaacttactttggtcct
gaacatgcccaagttctttcaggccatttacttcattctagcttgccaggtcttaaccgg
atggaacagatgtccttgatggctttagcagatactatcgcaactacaagtacggatatt
ggtgaaagcagagacagaagccaaggtggagaaactcttgatgaatgtggcttaaaattt
cttttggctgttcgacttcatacttttcttacaacttcccttccacctgtctatcgagct
caactccttcaccaaggtctctctactagtcattttgcctgggcatttcattctgtagca
gaagaagagctattgaatatgctgcctgctatgcagaaagatgatcccacctggtcagaa
ctaagagctatgggagtagggtggtgggttcgaaatactcgagtcttacgcaagtgcata
gaaaaggtagccaaagcagctttttatagaaagaatgatccattagatgctgccattttt
taccttgcaatgaagaagaaggctgtgatttgggggttatacagatctcaaaaagatacc
aagatgacacagttttttggacataattttgcagatgacagatggcgtaaggcagcatta
aagaatgctttttctttgctaggcaaacaaagatttgaacattctgcagcattttttctt
ctggctggttgcctgaaagatgcagttgaggtttgtctggaaaaattgaatgatgttcag
ttggctttagtaatagcaagactttatgaatctgaatttgacacatctgcaacatacaaa
tctatactgcataaaaaagttttgggaatcgattcttcagtcagagagcacagttcaatg
aatatgaatacacatgatgatcctttccttcggagtatgacatattggatcttggaagac
tatagtaaggctctagatacattaataaagcaacctataaaagaggaagaagatcaagcc
attgcatcttctacctgtaaccctgcagtatttaatttctacaattacctcaggacacat
ccacttttgttgagacgccattttggttcttctgatgcatcttctacacaaatatgttta
acaggagaaaatggattagcaggaaaaattaatttaagtgaaagaagattgtttttcacc
actgcacatgctcacttaaaagctggttgtcctatgttagctttagaggtattatcaaaa
atgcccaaagtcatcaagaagacaaaacttttttacagaacttgtagttttctagatacc
agtcaagattattctccttcttctccattaaggttggatacaaaggattctaagtcatct
agtattgattggtcacagagtggggtaaatggtttgaaatcttcttcagatggcttatca
gatgaacaatcaaattccactctttcatttgattggagccaaccaagtgttgtattccaa
gatgaatctttagacctaaagtgggatagtgataatgatgaggaaaatgaggacacacct
ctttcaatgaaagaactaaaaacttcacagataaaaatggataaaaagataaatgaaaca
aattctagctatacagactctttcagcatagatgaaaatgataccttaagtccatcagaa
gatatcattgctgtgcagttgaaatttagagcatgtttaaagattcttacagtagaattg
cgaacattatctactggctatgaaatagatggtgggaaattgaggtaccagctatatcat
tggcttgaaaaagaggtagtagctcttcagaaggcttgtgactattgttcagatgtggag
gatgcacactgtgtatttagtgaaagtgtggatgaagctatattaaatgaaaatacaaaa
gatttatctgatcaaccaaaaataaatcaattgagacagaatttccagaaaagacgacag
tggcttttgaagtatcagtcccttctaaggatgttccttagctattgtatactacatggg
tctcatggcggtggccttgcttctgtgagaatggaattgattctacttttacaagaatct
cagcaggaaacattggaaccaattagccctctgccagaacaaacctcaatacctctcctt
tttgcctgtacagctagtgccaaaacagtagttgccaatcctttattgcaccttagtaat
ttgactcatgatgtactacatgccataataaaccttgattcaccaccccatcctgacacc
caaaacaataaagtatatataatgcatacattggcagcatccctctctgcttgtatttat
cagtgtctttgtggtggccataactatagttcattgcaaacaaatcagttcactggaatg
gtataccagacattgctgtttcctcatcgacactccttgaaaacaacaagcttagatgaa
actataactcctaatacttctccagctcagtggccaggaattactgctcttattcgcctt
ttgaattctgctggggaggaagctcaatctggacttacagttttactttgtgaaattctc
acagcagtttatcttagtcttttcatccatggtctggcaacacattctagtaatgtgcta
tttcgaattgtggcccaccctctaaatgaaaaaatgtggtctgctgtctttggtggaggt
gctcacattcctaacaaagaacaaacagcatcaaaagctgtaactggaagatacttttct
atgcctagtccacaccaagtagtagtgttctccatggagtgtgtggggttttccaaagct
cttacagccatcagttctcataacactaccagtctttcagtttcttcttcagttgaagat
ggtgaaaaacagcacagacgatctaggacatcaaaaatagcttccaaagagtgccctcta
cagaattcttcctcacctgctggagaccaggaatctttgatttataaggaaaaatttatt
cctcctgagcttagtatctgggattatttcatagcaaagccttttttaccaccttctcaa
agtagagcagaatatgattcagaagagagtcaggaaagtggtgatgatgaggatgaggat
ggtgatgatgaagatgttttaacttcagattatcaactccaagagcatgctaattcaaat
tcatacagttggtcattgatgcgattggctatggtacagttggtgcttcataatttgaag
actttctatccattggctggtcatgatctttcagagcttccagttagctcaccactatgt
catgcagttctaaaagctcttcagtgctgggaacaagtcctcctccgaagacttgaaata
catggtgggccacctcaaaattatatggcaagtcatacctctgaggaaagtttgtcagca
ggtcctgcaattcttcgccataaagctttgcttgaacctacgaacaccccctttaaatct
aaacatcatctggcactatcagtgaagagactttggcagtacttggtgaaacaggaagaa
attcaggaaacttttatcagaaatatatttacaaagaagaggtgcctaaatgagatagaa
gctgaattgggttacccaggaggtaaagcaagaattatccataaagaatctgacattatt
actgcttttgctgttaatagagccaatagaaattgcatagcaattgcttccagccacgac
attcaagaactagatgtatctggaattctagctacacaaatatacacctgggtagatgat
gaaatagaacttgagacaaaagggtctgatgatttcttagtaatacatgctcgtgatgat
ctagcatctgtgcaaggcactacaccatatactcatagcaatcctggaactccaatcaac
atgccttggcttggtagtacacagactggcagaggagcatctgtggaatatgccaataaa
tttaatggaatcagaaaggaattggcaagaaaggagatgattaagaaaactattaataat
gtcagaagaatggcttcacatccaacactaccttattatctaacaggagctcaagatgga
agtgtcagaatgtttgagtggggtcattcccaacaaataacctgttttcggtctgggggc
aattcaagggtgacaagaatgagatttaaccatcagggaaacaagtttggaattgttgat
gctgatggatatataagcttgtatcagaccaactggaagtgttgtccagttactggaaat
actcctaagccatatttgacatggcagtgtcataacaaaacagccaatgattttgttttc
atcagctcctcatctctaatagccacagcaggtctctcaactgataacagaaacatttgt
ttgtgggatactcttgtggcacctgcaaatagcttggtacatgcttttacctgccatgat
agtggtgctacagtgcttgcatatgctccaaagcatcaggtgttaatatcaggtggcaga
aaaggttttacatgtgtatttgatcttcgccaacgacagcagagacaatttttccaaagc
catgattctccagtaaaagctattgctgtagatccaactgaagaatactttgtcacaggt
tctgcagaaggcaatataaagttgactgtattctggcctctacttttagagaaggatttt
gatgaactggagagcaagaaaataaggcagccaggttggtga
DBGET
integrated database retrieval system
