KEGG   Gasterosteus aculeatus (three-spined stickleback): 120807785
Entry
120807785         CDS       T07457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120807785
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gat01009]
    120807785
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gat03021]
    120807785
Protein phosphatases and associated proteins [BR:gat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120807785
Transcription machinery [BR:gat03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120807785
    Little elongation complex (LEC)
     120807785
SSDB
Motif
Pfam: ELL Occludin_ELL DUF601
Other DBs
NCBI-GeneID: 120807785
NCBI-ProteinID: XP_040016094
LinkDB
Position
II:15912243..15933057
AA seq 608 aa
MASLSQEHRYGLSCGRNNRNSPNRTLYHVKLTDTAIRALEAYQKLKISLPSEPSICFKGN
QGYIKIPAPTPESPSALRVFSFYLSSDSKDQPQASFDCIHQYVSSDGREQLEGQGTIQDK
ITVCATDDSYQMTRERMSQVEKDSWSRSAIEIKPGATHPTKCVKLHKRPAPLSASDSSVH
KPSTNNRKNGGVATPTQKPLRERIIHLLALKPYRKPELLLWLERERAGPKDKTELGATLE
EVARVNPKDSSYLLRDDFYKHVQRDWPGYSEEERQHISRMLARKLQPHIGHQTMNLQANV
SVLKTSEDTTLQHSAAKNPAAKRPVPFDLLEKPTVKRQRPADQKLQQQPTANGLLNNKGH
DVAAPMLSPGFLTKTEFQRTSNHTGNQAGSPGGHGGFPVMPKLTSASDTPVSESRDREPK
VSSRQPPQRDSDCAHQQPANSQHNKKKSKKHKDKERERLKDNKASEWLETSPDLKQNLDK
LDNPDITHAAASEEKPDYVLTYGTIVTLEQRRRYQEDFCAEYDEYKDLHSRIATITHMFV
QLGSKIKSLSPGTQEYKIMEDQILEKYNKYRKKFPGYREEKKRCEYLHEKLSYIKQLIKD
YDVSRASS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcttcgctcagccaggagcaccgctacgggctgtcctgcgggagaaataacagaaac
agccccaacaggacgctgtaccatgtcaagctcacggacacggctatcagggcgctggaa
gcgtaccagaaactcaagatctctttaccaagtgagccatcaatatgtttcaaaggaaac
caagggtacatcaagatccctgctccaacgccagagtcaccttctgctctccgcgtcttt
tccttttacttatccagcgacagcaaagaccaacctcaagccagctttgactgcatccat
caatatgtttcaagcgacggccgcgagcagctggaaggtcaaggcaccatccaggacaag
atcacggtgtgcgccaccgacgactcctaccagatgacgcgcgagaggatgtctcaggtg
gagaaggacagctggagccgctccgccattgagatcaaacccggcgccacgcatccaact
aaatgtgtcaagctccacaagaggccagctcctctgtctgcatcagacagcagcgtccac
aagccgtccaccaacaacaggaagaacggcggcgtggccacgccaacccagaagcccttg
agggagcgcatcatccacctcctggccctcaagccctacaggaaaccagagctgctgctg
tggctggagcgagaaagagccggcccgaaggacaagaccgagctgggcgctacgctggag
gaggtggcaagagtgaatcccaaagacagcagctacctgctgagggacgacttctacaag
catgtgcagagggactggcccggctacagcgaggaggagaggcagcacatcagcaggatg
ctggccaggaagttgcagccacacattggacatcaaaccatgaatcttcaagcaaatgtg
tccgtgctaaagacatctgaggatacgacactacagcacagcgcagcaaagaatcctgcg
gcgaaacgtcctgtgccttttgacttattggaaaagccaactgtgaagagacaaagacca
gcggaccaaaagttgcaacagcagcccacggcgaacggactgttaaacaacaaaggacac
gacgttgcagctccgatgctcagccccggtttcctcacaaagactgagtttcaacggaca
agtaaccatactggtaaccaagcgggctcgccggggggccacgggggctttcccgtgatg
cccaagctgacaagcgcctctgacacacctgtctcagagagcagagatcgagaacccaaa
gtgagcagccgccagccaccgcagagggactccgactgcgcccaccagcagccggccaac
agccagcacaacaagaagaaatctaaaaagcacaaagacaaggagcgggagcgcttaaaa
gacaacaaggcctctgaatggttggagacgagtcctgatctcaagcagaacctggacaaa
cttgacaatcctgacatcacacacgctgcggcctctgaggagaagccggattatgtgcta
acatatggcaccatcgtgactttggagcaacgtaggaggtaccaggaggatttctgtgca
gagtatgatgaatacaaagacctccactcccggatcgccaccataactcacatgttcgtt
cagttaggatccaagatcaaaagcttgtcccctggcacacaagaatataagataatggaa
gaccagattcttgaaaagtacaacaagtatcgaaagaagttccctggctaccgggaagag
aagaaacgctgcgaatatctccatgagaaactgtcctacatcaaacagctgatcaaagac
tacgacgtctctcgcgcttcttcgtag

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