Gasterosteus aculeatus (three-spined stickleback): 120813011
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Entry
120813011 CDS
T07457
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120813011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120813011
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
gat04031
]
120813011
Membrane trafficking [BR:
gat04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
120813011
GTP-binding proteins [BR:
gat04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
120813011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_22
VGCC_beta4Aa_N
ATP-grasp_5
TniB
Motif
Other DBs
NCBI-GeneID:
120813011
NCBI-ProteinID:
XP_040025100
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRVKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatatggctctaccagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgcctgatccgccgcttcacggagggccgcttcgcgcaggtgtcggaccccacg
gtgggcgtggacttcttctcccgcctggtggagatcgagcccgggaagcgcgtcaagctg
cagatctgggacacggcgggccaggagcgcttcagatccatcaccagggcctactaccgc
aactccgtgggcgggctcctcctgttcgacatcaccaaccgccgctccttccagaatgtc
cacgactggctggaggaggcccgcagccacgtccagccccacagcatcgtcttcctgttg
gtgggccacaagtgtgacctggaggctcagcgccaggtgacccgccaggaggcagagaag
ctggcgggcgcttacgggatgcgctacgtggagacgtcggcccgcgacgccatcaacgtg
gagcacgccttcaccgagctgaccagggacatcttcgccctggtgcggtccggcgacatc
accatccaggagggctgggaaggcgtgaagagcgggttcgtgcccaacgtcgtccactcc
tcggaggaagtaaccaagagcgaccgccgctgtctgtgttga
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integrated database retrieval system
