Gasterosteus aculeatus (three-spined stickleback): 120815619
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Entry
120815619 CDS
T07457
Name
(RefSeq) fibronectin-like
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
120815619
NCBI-ProteinID:
XP_040026364
LinkDB
All DBs
Position
III:7009576..7021324
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AA seq
2157 aa
AA seq
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MHDTSDTSHTLTDLECGQTYAFRIAAQDGNCHSSYSPPVKISTVPCEPTNFTGHVDCGTN
KGNFSWSESSGAGFYTVEVAGEHGHVASCSSSDTSCALRLDCGRTYSAALVASTESCNSS
KRAGITFDSAPCLPEDVFAELQCDSNVMNVSWTQASGPDEYTAWAISTEGHRASCNSSSN
SCSIHDLQCGKVYEVVVTSSSIECETIAGSDYEVHSAPCKPENTNVEQNCSSDVVTVEWD
QSSTTQNYTVKATRAAGVNSTCESAESSCSFLDLSCGQLYTFTVVGHTNVCRSEMSSPTE
KLTAPCPPTNVSAVLNCTTLNALVSWRSSDAATFYTVQATSMNGHNSSCSEMGTSCILND
LVCGQDYSVVVGAMHEGCPGPSSVPARLTTEPCAPTNLSILYNMSTAQVTWGAARGAGSY
WVQAVTGQGLMVTCNSTNTSCSLNGLQCSRIYNVSLTARNLDCDSTIAETRRLVTEPCPS
TNVQASMSCEQLSATVSWQQSDLAVGYVAYFDNQEDHNASCVGSDADAQCVVSGLMCGTV
YNVWVKVLGWQNTSSDSTVTTLTSVPCPTSSIQAVVDCEAQSATVSWQPSAGAASYVSEL
SALSGGATSCATNQTECHFSSLQCGEEYDVTVKALGDSCNGTAQMAGHLTAVPCAPANLS
VHYNASTAQVTWGAARGAGSYWVQAVTGQGSTVTCNSTGTSCSLNGLQCSRTYNVTATAR
NLGCNSAVTSEPSPLTTEPCPPTNVEASMACEQLAANVSWQRSELAVGYVAYFGDQNGRY
ASCVGSGARAYCVASGLMCGAVYSVRVKALGRQYNSSDSAGISLTSAPCLPSEVEVEADC
NSDGAAVVSWNATHGAANFSLTAVVGGRLQTLCATQQDRCHVTSLTCGETYSLSFSAVNE
QCSLTAPERANLTTRPCPPQRVAVDLQCGSRTAVLSWQPRSDVELYEASAVKTSGGGVLT
CNATGATCQFAGLECGEMYNFTVRAQRAGCCSQASTAVLIQTEPCQPVIVSAEAPCQSEQ
VQISWHQTSGVVNYSVTASGSLGYVEVYNTTRTLLTAVLPCGQNYNVTVQGQGSGCASIP
SSPVFFKTTPCVPRNVATDEECEINAGSVSWGPTDGAETYVAIATGLEGHTHQCDANITS
CTWNDLHCGEVYSVVVRAKEGNCTSLPSNTSVVHMEPCVPQNLTATVNCGMNVVSLSWDG
AENNHYVVSGEAGNKKVEHRTSATTADFSDFSCGQNYSFTVTPHNMHCSGNPSAPASIET
RPCPLAGISTMQDCLAGIVMVTWQTSDGSDYYTATIQTETGVSEMCMSESNECCVPGLTC
GYNFSVSVTASNKQCNVTSTQSTSLQSVPCAATNVSAIMHCANSTALVSWAAGRGAVQYS
VMARGGRSNVSCQTSDLSCSLENLTCGRRYTVQVVAMNDNCSSVPSQPLSLDSAPCPPQN
VSAEVSCLSNSMTVSWDAVEGGDNFTVSAVADNGGSSGSCNTTNAACSISNVTCGNTYTV
EVTSVRGACRSQPSQGHSITAAPCQPQGIGGNLNCVTNSAWIWWDAAPGADSYTVSAAGG
WDYRANCTTSSNTTCEVKDLECGKLYNFSVTAKSSRCESWPSAAIHLQTARCTLSGITAV
PLCHNSSILVLWSLMDGGGGETVYTVTAEASDRSLLSCNNTGTSCYLEGARCDLRYTVIV
AASSDQCSGLRSPPYTISMEPCPPGNLVVNATCEDNSAQVSWGASPVAETYHVVAVGGDG
HVHAYNTTSTNCTLPELHCDQQYTVFVTAGHENCSSEASQKATLNTGPCQPDGLSVTFQC
DNQSAVLSWTPRDNAARYNACARAANGDMLYCHGTEPTCTIQALECGVVYNFSVQASDGT
CSSSFSEPVQSGAVPCPPGAVDVQPLPMEREIQVMHFSWTQIACGDVEYKLELTGSLPGD
GEAQFELSSYWTSGTYFEIPLPCGSSFSAAVESRNAAGTSVPSGPLNRTTAPCPPSGVVY
SGNSSFARVAWNASALAATYTVYDNSAAPKAQLCSTEGLACSLSNITSSNLVITATNTAG
ESETTTVKTDVSTQGRKRRDLSGQKPEHGGLWAPVLKVTQATATVIFIEWSPIDGASHYR
LVIREQSSSSEPQAITVLGESIILTDLGPHSAYCFSVSAAGGPESEPACVQTGPVRR
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacacctctgatacctcacacacattgaccgacctggagtgtggacagacgtac
gctttccgcatcgcggcacaggacgggaactgccacagcagctacagcccgcccgtgaaa
ataagcacagtcccttgtgagccaactaacttcaccggtcacgtggactgtggcacgaac
aaagggaatttctcctggtctgagagcagtggagcaggtttctacaccgttgaggtggca
ggggagcacggccacgtggcgtcctgttcctccagcgacacctcctgcgctcttagactc
gactgtggccggacatactcggctgcactggtggcttccacagaaagctgcaacagcagc
aaacgggccggcatcacctttgactctgctccgtgtctgccagaagacgtctttgctgag
ctacagtgtgacagcaatgtgatgaatgtgagttggacacaggcctctggccccgacgag
tacaccgcctgggccatcagcaccgagggccacagagcatcctgcaactcatcgtccaac
tcctgctccattcacgatctgcagtgcggcaaggtctacgaggtggtggtcacctcgtcc
tccattgagtgcgaaaccattgctggctcagactacgaggttcactctgctccttgtaaa
cccgagaacaccaatgtcgagcagaactgtagcagcgacgtggtgacagtagagtgggac
cagagcagcaccacacagaactacaccgtgaaagccacgcgcgctgcgggtgtcaactcc
acctgtgaatccgccgagagcagctgctccttcctggacctgagctgtggtcagctctac
accttcactgtggtgggacataccaacgtgtgcagaagcgagatgagctctcccacggag
aagcttaccgccccttgtcctcccaccaacgtgtcagctgtactgaactgcactacactc
aacgctctggtcagctggaggagctcagatgcagccacattctacaccgtgcaggcgacc
tccatgaatggacacaactcctcctgcagtgagatgggcacatcctgtatcctcaacgac
ctggtgtgtggacaggactactctgttgttgtgggggccatgcacgagggctgtcctggc
ccgtccagtgtccctgccaggctcactacagagccctgtgcccccacaaatctctctatc
ctctataacatgagcactgctcaggtgacgtggggggcagcgagaggtgccggctcgtac
tgggtccaggctgtgacaggccagggcttgatggtcacctgtaactccaccaacaccagc
tgctccctgaacggcctgcagtgcagtcggatctacaacgtctccttgacggcacgaaac
ctggactgcgacagtacgatcgccgagacgcggcgcctcgtgactgaaccctgcccgtcc
accaacgttcaagccagcatgtcgtgtgagcaactaagtgcgacggtttcctggcagcag
agcgacctcgccgtaggttatgtcgcctactttgacaaccaggaggaccacaacgcttct
tgcgttgggtcagacgcagacgcccaatgtgttgtctcaggactgatgtgcggcaccgtg
tacaacgtctgggtcaaggtcttaggctggcagaacaccagctctgatagcacagttacc
acgcttacatcagtaccttgtccgacgagctccatccaagctgttgtggactgcgaggcc
cagtctgccaccgtttcctggcagccaagcgctggagccgcgtcctacgtttcggagctt
tcggcgttatcaggcggcgccaccagctgtgccacaaaccagaccgaatgtcacttcagc
tcgctgcagtgcggggaggaatacgacgtcaccgtgaaggccctgggagattcttgcaac
ggcactgctcagatggcgggacacctcaccgcggtgccatgtgcccccgcgaacctctcc
gtccactacaatgcgagcactgcccaggtgacgtggggggcggccaggggtgccggctcg
tactgggtccaggctgtcacaggccagggctcgacggtcacctgtaactccaccggcacc
agctgctccctgaacggcctccagtgcagtcgcacctacaacgtcaccgcgacggcacga
aacctgggctgcaacagcgccgtgacctctgaaccctctcctctcacgacagaaccctgc
ccgcccaccaacgtggaggccagcatggcgtgcgagcaactggccgccaatgtttcctgg
cagcgcagcgaactcgccgtgggttacgtcgcctacttcggcgaccaaaatggccgctac
gcttcctgcgttggctcgggcgcacgcgcctactgcgttgcgtccgggctgatgtgcggc
gcggtgtacagcgtccgggtcaaggcgctgggtcggcagtacaacagctctgacagcgca
gggatctctcttacgtcggccccgtgtctgcccagcgaggtggaggtggaggccgactgc
aactcggacggcgccgccgtcgtgtcctggaacgccactcatggcgcggcaaacttttcg
ctgacggccgttgtcggtgggcgtcttcagaccctgtgtgcgactcagcaggaccgctgt
catgtgacgagcttgacttgtggggaaacctacagcctcagcttcagcgccgtgaacgag
cagtgcagcctcacggcgccggagcgcgccaacctcaccacgcgtccttgtcctcctcag
cgtgtagctgttgacctgcagtgtggttcccgcaccgcagtcctgtcctggcagccgagg
tctgatgttgaactgtatgaagcgagcgccgtcaagacgtccggagggggggtgctgacg
tgcaacgcgacaggcgctacctgtcagttcgccggtctggaatgtggagagatgtacaac
ttcaccgtgagagcacagcgtgcaggctgctgcagccaggccagcaccgccgtcctcatc
caaacagagccctgccagccggtcattgtatctgctgaggcgccctgtcagagtgagcag
gtccagatctcctggcaccaaacgagtggtgttgtgaattactctgtaacggccagcggg
agcctcggatatgtggaggtctacaatacgacccggacccttctgaccgctgttttgcca
tgtgggcagaactacaacgtcacggtgcaaggacaaggcagcgggtgcgccagcatcccc
agcagccccgtcttcttcaaaactactccatgtgtccctcgcaatgtggcaaccgatgaa
gagtgtgaaattaacgctggctctgtcagctgggggcccactgatggtgctgaaacatat
gttgccatagcgacggggcttgagggccacacgcaccagtgcgacgccaacatcacctcg
tgcacctggaacgaccttcactgtggagaagtgtacagtgttgtggtgagagcaaaggaa
ggcaactgcaccagtctgcctagcaacacctctgtcgtccatatggagccgtgcgtgcct
cagaatttgaccgccactgtgaattgtggaatgaacgttgtttcactgagctgggacggc
gctgagaacaatcattatgtggtatcaggagaggcgggaaataaaaaagtcgagcacagg
acttccgccaccacagcggacttttctgacttcagctgcggacaaaactacagtttcaca
gtaacacctcacaacatgcactgttctggaaaccccagtgcacctgcttccatagagacg
cggccttgtccacttgcaggaatctcgaccatgcaggactgtctcgctggcatcgtcatg
gtaacctggcagaccagtgatgggtcagactactacacagccaccatccagactgaaacg
ggcgtctcagaaatgtgcatgtctgagtctaatgaatgctgcgtccctggcctgacctgc
gggtacaacttctccgtgtcggtcacggcctccaacaagcagtgcaacgtcacctccaca
caaagcaccagtctgcagtcagtgccctgtgctgccaccaatgtctcggccatcatgcac
tgtgctaacagcaccgctctggtgtcctgggctgccggtcggggtgccgtgcagtactcc
gtgatggcccgcggcggtcgaagcaacgtcagctgccagacctcagacctcagctgtagc
cttgagaacctcacgtgtggccgccgctacaccgttcaggtggtggcaatgaatgacaac
tgctccagtgtccccagccagcctttgtcactcgactcggctccctgcccgcctcagaat
gtgagtgcagaggtcagctgtttgtcgaacagcatgacggtctcttgggacgccgtcgag
ggaggagacaactttacggtgtcagcggttgcagacaacggaggaagcagcggatcgtgc
aacaccacaaacgccgcgtgctccatcagcaacgtgacctgtggaaacacgtacacggtc
gaagtcacctcggtcagaggcgcctgccgcagccagcccagccagggccacagcatcacg
gcggctccctgccagcctcagggaatcggaggcaacctcaactgtgtgaccaattctgcg
tggatatggtgggacgcggctccaggggcggacagttacacagtgtcggctgcgggtgga
tgggactatcgagccaactgcaccacttcctccaacaccacatgtgaggtgaaggacctg
gagtgtggcaagctttataacttcagcgttaccgctaagagcagcagatgtgagagttgg
ccaagtgccgccatccacttgcagacagcccgctgcaccctctccggcatcacagcggtg
cctctgtgccacaactcttccatcctcgtcctgtggagcctgatggacggcggcggcgga
gagaccgtgtacaccgtgacagccgaagccagtgaccgtagcctgctgtcctgcaacaac
accggcaccagctgctacctcgagggagcccgctgcgacctccgttacaccgtcattgtt
gccgcttcatcagaccagtgcagcggcctcaggagcccaccgtacacgatcagcatggag
ccgtgtccgcccggcaacttggtggttaacgccacctgtgaggacaacagtgcccaggtg
tcctggggcgcctcccctgtagccgagacctaccacgtcgtcgccgtgggtggagacgga
cacgtccatgcctacaacaccacctccactaactgcaccctaccagagctccactgcgac
cagcagtacacggtattcgtgactgccggccacgagaactgctccagcgaggccagtcaa
aaggccacactcaacacaggtccctgccagcccgacggtctctccgttactttccagtgt
gacaatcagtcggcggtgctgtcgtggactccccgagataacgccgcgcgctacaacgcc
tgtgcccgggctgcaaatggagacatgttgtactgtcacggcacggagcccacctgcacc
atccaggcccttgaatgtggagtggtttacaatttctctgtccaggcctcggacgggacc
tgcagcagctccttcagtgagccggtgcagagtggagcagttccctgtccgcctggcgct
gttgacgtgcagccacttccgatggagagggagatccaagtgatgcacttcagctggacg
cagatcgcctgcggggacgtcgagtacaagctggagttaacgggaagtctgccgggagac
ggcgaggcccagttcgagctctcttcctattggacgagcggcacgtactttgagattcct
ctcccctgtggttcgtccttctctgctgcagtggagagcaggaacgctgccggcaccagc
gtcccatccgggcctctcaatcgcacaacagctccctgtccaccgtcgggggttgtgtac
agtggtaacagctcctttgccagagtcgcgtggaacgcctccgcgctcgccgccacatac
acagtgtacgacaacagcgctgcgccaaaggcccagctgtgcagcaccgaggggctcgcg
tgctctctgtccaacatcacctccagcaacctggtgatcacagccacaaacacagccgga
gaaagtgaaacgaccactgtaaagacagatgtgtcaacccaaggacgcaaaaggagagat
ctcagtggacaaaagccagagcacggaggcctctgggcccccgtgctgaaggtcacacaa
gcaacggcaacagttatttttattgagtggtctccgatcgatggagcctcccactacagg
ctggtgatcagggagcagagcagctccagcgagcctcaggcgataacagtgctgggggag
agcatcatcctcaccgatctgggcccccactcggcttactgcttctccgtgtcggccgcc
ggcgggccggagtcagagccggcgtgtgtgcagacggggccggtgcgccgctaa
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