Gasterosteus aculeatus (three-spined stickleback): 120815873
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Entry
120815873 CDS
T07457
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120815873
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120815873
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-tcix
Rtt106_N
LMBR1
Fib_alpha
PRP1_N
TRAF3_RING
FapA
rhaM
CENP-Q
Motif
Other DBs
NCBI-GeneID:
120815873
NCBI-ProteinID:
XP_040026859
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Position
III:complement(14240596..14242813)
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AA seq
374 aa
AA seq
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MAEVTPQLLETFSCSVCLNVLKDPVTIPCGHSYCMSCIKTNWDIENRRGINRCPQCGTIF
TVRPALVKNAMLANLVEQLNAVQAIPADHCYAAPEDVACDFCTGRKLKAFKSCRMCLASY
CEKHLQPHYDVAALRNHKLVDPSKELQENICSLHNEVMKIFCRTDQQSICYLCFMDEHKD
HDTVSAAAERTERQKELEVSLLNIQQRIQDREKGVKLLQQQVEKINEATEDSDKIFHELI
SFMMKRSSDVKKRVKSQERAELSRVRGLEMNLQQEISELKRSDAELQELSHTQNLNQFLQ
NYPSVSPLSESTDSFSISICPPSCYKDFTTALSEIRDKLEDVLREKWTNVFLTVAEVDVL
LSQSEPNTKAGFLK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtaacacctcagctgttggagaccttctcctgttctgtctgtctgaacgtc
ctgaaggacccggtgacgattccctgtggtcacagctactgcatgagctgtattaaaacc
aactgggatatagagaatcggaggggaatcaatcgctgccctcagtgtggaacgatcttc
acagtgaggcctgccctggtgaagaacgccatgttagcaaatttagtggagcaactgaat
gcagtccaagctattcctgctgatcactgctatgctgctcctgaagatgtggcctgtgat
ttctgcactgggaggaagctgaaagccttcaagtcctgtcggatgtgtttggcttcttac
tgtgagaaacaccttcagcctcattacgatgtggctgctttaaggaatcacaagctggtg
gacccctccaaagagcttcaggagaacatctgctctcttcacaatgaggtaatgaagatc
ttctgtcgtactgatcagcagagcatctgttatctctgctttatggatgaacataaagac
cacgacacggtctcagctgcagcagaaaggactgagaggcagaaagagctggaggtgagt
ctactcaacatccagcagagaatacaggacagagagaaaggtgtgaagctgcttcaacag
caggtggagaaaatcaatgaagcaacggaggacagtgacaagatcttccacgagctgatc
tctttcatgatgaaaagaagctctgatgtgaagaagcgggtcaaatcccaggagagagct
gaattgagtcgagtcagaggtcttgagatgaacctgcagcaggagatctctgagctgaag
aggagcgacgctgagctgcaggagctctcacacacacaaaatctgaaccagttcctccag
aactacccctcagtgtcccccctcagtgagtctacagactcattcagcatcagcatctgt
cctccgagctgctataaggacttcacaacggctctgtcagaaatcagagacaaactagag
gacgtcctgagagagaaatggacaaatgtcttcctgactgtggctgaagtggatgtttta
ctctcacaatcagagccaaacaccaaagctggattcttaaaataa
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