Gasterosteus aculeatus (three-spined stickleback): 120816612
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Entry
120816612 CDS
T07457
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120816612
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120816612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
U-box
Sec10_N
Motif
Other DBs
NCBI-GeneID:
120816612
NCBI-ProteinID:
XP_040028286
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Position
III:complement(14088881..14091099)
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AA seq
552 aa
AA seq
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MAQQGNPLDQERISCSLCLDLLKGPVTIPCGHSYCMSCINTHWDKEDEKNLHSCPQCRRI
FAPRPVLVKCTMLADLVEQLKKSGLQAAPANHCYAGPEDVACDFCTGRKLKAVKSCLVCL
ASYCEKHLQPHYESRTFEKHKLVDPSKELQENICSLHGEVMKIFCRTDQQSICYLCLMDK
HKDHDTVSAAAERSERQKELEVSRLNIQQRIQDREKGVKLLQQEEEKINLSADKAVEDNE
KIFSQLICLIEERNSDVKQQVRSQQRAEVSRVKDLQEKLQQEISELKRSDAELQELSHTK
DLNQFLQNYPSVSPLSESTESSSIKIRPLSCFEDVTAAVSEVRDKLEDVLREKRSNVLLT
GTDLDVLLSEPQPKTRAEFLQYSSKITLDPITADACLSLSKGNKKVTFNGTPNDEKQPER
FTDRFQVLSRESLTGRCYWEVEKGKGGINIVVAYKQHKTVNEKTAGRQKSWALGIFKDRY
NFKHNKVQTPVSGPRSSRVGVYLDYRAGVLSFFSITETMTLLHRVQTTFTQPLYAGLHLF
RPTGNSAELCKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaaatcctctggaccaggagagaatctcctgttccctctgtctggac
ctcctgaagggcccggtgactattccctgtggacacagctactgcatgagctgtattaac
acccactgggataaagaggatgagaagaacctccacagctgccctcagtgtaggcggatc
tttgccccgaggcctgtcctggtgaagtgcaccatgttagcagatctggtggagcagctg
aagaagagtggactccaagctgctcctgccaatcactgctatgctggacctgaagatgtg
gcctgtgatttctgcactgggaggaagctgaaagccgtcaagtcctgtctggtgtgtctg
gcttcttactgtgagaaacaccttcagcctcattatgagtcccggacatttgagaaacac
aagctggtggacccctccaaagagctccaggagaacatctgctctcttcatggtgaggtg
atgaagatcttctgtcgtactgatcagcagagcatctgttatctttgcttaatggataaa
cataaagaccacgacacggtctcagctgcagcagaaaggtctgagaggcagaaagagctg
gaggtgagtcgactcaacatccagcagagaatccaggacagagagaaaggtgtgaagctg
cttcaacaggaggaggagaaaatcaatctctctgctgataaagcagtagaggacaatgag
aagatcttctcccagctgatctgtctcatagaggaaagaaactctgatgtgaagcagcag
gtcagatcccagcagagagctgaagtgagtcgagtcaaagatcttcaggagaagctacag
caggagatctcagagctgaagagaagcgacgctgagctgcaggagctctcacacacaaaa
gacctcaaccagttcctccagaactacccctcagtgtcccccctcagtgagtctacagag
tcgtccagcatcaagatccgtcctctgagctgctttgaggacgttacagcagctgtgtca
gaagttagagacaaactggaggacgtcctcagagagaaaagatcaaacgtcttactgaca
gggactgacctggatgttttactgtcagaaccacaaccaaagacaagagctgaattctta
cagtattcatccaaaatcacactggatccaatcacagccgacgcttgtttgtcattatct
aaaggaaacaaaaaagtaacattcaatggaacaccaaatgatgaaaaacagcccgaaaga
ttcactgatagatttcaggtcctgagcagagagagtctgactggacgttgctactgggag
gttgagaaaggcaagggtggaattaatattgtagtagcatacaaacaacataaaacagta
aatgaaaaaactgcaggtcgtcaaaagtcttgggcattgggtattttcaaggatcgttat
aattttaaacataacaaagtccaaacccctgtctcaggtcctcggtcctccagagtagga
gtctacctggactacagagcaggtgttctgtccttcttcagcatcactgaaaccatgacg
ctcctccacagggtccagacgacgttcactcagcctctctatgctggacttcatcttttc
cgtccaactggaaacagtgctgagctgtgtaagttgtag
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