Gasterosteus aculeatus (three-spined stickleback): 120816629
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Entry
120816629 CDS
T07457
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120816629 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120816629 (rpp40)
03016 Transfer RNA biogenesis [BR:
gat03016
]
120816629 (rpp40)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120816629 (rpp40)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
120816629 (rpp40)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
120816629 (rpp40)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
120816629 (rpp40)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
120816629 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
120816629
NCBI-ProteinID:
XP_040028324
LinkDB
All DBs
Position
III:complement(17650395..17659365)
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AA seq
352 aa
AA seq
DB search
MFGDLERNPRSLLVCDRSSFLDDKNRLSSQVEQLHFNYKVSMLLPECSSTPSHLEAVLNS
IDSFYLIRNLPIHELLDKHFLETAVHHGGVSGLSYRTRIDEDNCVALLPSGRLSLSLDKD
SFELLGVEGKPSRFNHRTNSRFVVSVDLTDSSMAPGGRGYQRFVTGLRSRLKLKTDFLLS
HPGGGASLQALLSRYDWSEHRPEIQSHTLIDFTCPLLTSDLQSCDPHCLLEWLGAVDAHV
SCENLSSSFLSSFVCPEPKATTSRALSVSVRGLLRPQGVHRLIQQIRLYLEQPQVESWAS
LTVHGFVDSPVSWSEEEHGVLRGGENFYSLLMFPDQTYHLHLGTGAHDTCPP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttcggggatctggagcggaacccccggagtctgctggtctgtgatcggtccagtttc
ctggatgacaagaaccgactgagctctcaggtggagcagctgcacttcaactacaaggtg
tccatgctgctacctgagtgtagctccaccccctcccacctggaagctgttcttaacagt
attgacagtttctaccttatcaggaatctgccgatacacgagctgctggacaaacacttc
ctggagaccgctgtgcaccatggaggtgtatccggtttgtcctaccggaccaggatcgat
gaagacaactgtgtcgccctgctgccaagcggtcgcctgtctctctctctggataaagac
tcctttgagttgttgggagttgaagggaaaccgtccagatttaaccaccgaacaaacagc
agatttgttgtgtcagtcgatttgactgacagcagcatggctcctggtgggcggggctac
cagagattcgtgacaggtctgaggtcacgcctcaaactgaagacggacttcctgctgtca
catccagggggtggagcctcactgcaggccctcctctctcgctatgattggtcagagcac
agacctgagatccaaagccacaccctgatagactttacctgtcccttgctaacctctgac
ctgcagtcatgtgacccccactgccttttggagtggctcggggctgtggatgcccacgtc
agctgtgagaacttgtccagcagcttcctgtcctcatttgtctgtcctgagccgaaggcg
acaacaagtcgagctctgagcgtctccgttcgcggacttctgcgtcctcaaggcgtccac
agactcatccagcagatcaggttgtacctggagcagcctcaggtggagtcatgggcctcg
ctcacggtacatggatttgttgacagtccggtttcgtggagtgaagaagaacacggtgtc
ctcagaggtggcgagaacttctacagcctgctgatgttccctgaccagacctaccacctc
cacttggggacaggagcccacgacacctgtcctccatga
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