Gasterosteus aculeatus (three-spined stickleback): 120820579
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Entry
120820579 CDS
T07457
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120820579
Membrane trafficking [BR:
gat04131
]
Protein recycling
Others
Others
120820579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
Big_2
Motif
Other DBs
NCBI-GeneID:
120820579
NCBI-ProteinID:
XP_040034457
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Position
VI:complement(12721601..12756879)
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AA seq
1247 aa
AA seq
DB search
METRPGHCLFIIFSEWIWLFTLTSILGGTHAELRCIPLCRLPLPRAAPRELSQLDLTNSI
EAPGEDNLVGSADWSPGANSDEKRNVAELTASEESSSKVRARPQGNDASGKDALDGQPKL
SDPKVFPGSVSTAALPPPSDGSVTENDNGEAEKDSDENGSRVDVTEGLDEGTDAATWRRT
RSARSAETWSGFRPEDGEDASFSDQEEFELPSSTFALSGDTAHNQAMVHWSGQNSSVILM
LTKYYDFNSGRVTESSLWRSTDYGTTYEKLNEKVGPKTILSYLYVSPNNKRKIMLLTDPE
VDSSLLISLDEGATYEKHGLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQLVQ
DGVIPNRFYWSRLGLDKEQGMIHLEISVSDGRSQYITCKLQNCSDGNKGKPFPGFIIPNS
LVVQDEYVFIQVPVGGQSVHYVSYKRNAFYPMKLPKYTLPKDLQIISTDDNQVVAAIQDR
HQNDSYNLYMSESRGLFFTLMLENAVSSGGPEGNIMIDLYEVAGIKGVFLSNKVVENQVK
TYITYNKGRDWRLLHAPTTDLQGNKVYCEQPYCSLHLHLHVSENPYTSGNIVSKDSAPGI
IIASGVVGPELTSNNVSIFITSDAGNTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHI
WLSFDEGRNWDKYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLIKTDFRSIFQ
QRCTSEDYMTWQLHNEGEVCIMGMKRIFQKPKANVRCVNARNQYISQMSNSCPCTEADFE
CDYGFERQVDRSCAPSFWFVPTATSRDCIRGDSFLNTTGYRRAFSNNCTDGALLKYSPTR
QKCPSQAPRGLQLFTSEGTLVATLDRNVTFLVFLEEGLGSMTSITVDFGDGTAISYVNIS
SIDDGVKHIYSRVGIYQVSATATNTLGFDRVILYLHVSCQLEQVQLSAPSVVVKNKAVNL
TTVLRPNNVGTVSYYWWFDNKTEPVVTLDGTMSFTFSKEGRHTVTVQASVGNTVHQDQMT
VTVYDYFRSYVLGFSSNLDEQNPGMSEWREDISRVVKSNMVQVTGINDEQLLVTVIPGLP
TTAEIFIVPEKKARGGGMDEKWAHLDQLSQVLLSALNQDLIQFTLKPGVQVNVYATQLSP
APLVDSSDSGHSATAVIMLVSVVLMGLAVFVIYKFKRKIPGINTYTAEQPDKEQEVIPTV
TSIDIPNPEGEKLTSLDHVDVQLDSRARGYLPSHTDIKLSDEAPHVF
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgccccggtcactgcctttttatcattttctctgagtggatttggctcttc
accttaacttccatcttgggcggaacacacgcggagctaaggtgcattcctttgtgccgg
ctgccgcttcctagagctgcaccccgggaactctcccagctggatttgactaattccatc
gaggcaccgggtgaagataatttggttggatccgcggattggtcaccgggtgccaattcc
gacgaaaagcgcaacgttgcagaattaacggcgagcgaagaaagttcgtccaaagtgcgc
gcacggccgcagggaaatgacgccagcgggaaggacgcgttggacggtcagccaaaactt
tccgacccgaaagtgtttcctggaagtgtttcaaccgcggcgcttccccctcccagtgac
ggcagcgtgaccgaaaatgacaacggtgaagcagaaaaggacagcgacgaaaacgggtcg
cgggtggatgtgacggagggactggacgagggcacggatgcggccacttggagacgaacg
cgcagtgcgaggagcgcggagacctggtccggattcagacccgaggacggggaggacgct
tcgttttcggaccaggaggagtttgagctcccaagttcgacatttgcactcagcggggac
acggcgcacaaccaggcgatggtgcactggtccggacaaaacagcagcgtgatcctcatg
ttgacaaagtactacgacttcaactctggcagagtaacagagagttctttatggaggtca
actgattacggcaccacttatgagaagcttaacgagaaagtcgggccaaaaaccatcctg
agctacttgtacgtgagtccgaacaacaaaaggaagatcatgttactcaccgacccggag
gtggatagcagcctgctcattagccttgacgagggggcaacctacgagaaacacggcctg
gcctttgatatcctcagcctgctttttcaccccgagcaggaggactggatcctggcttac
agccacgaccaaaagctctatgtctctgttgaatttgggaggagatggcagcttgtgcag
gacggcgtcattcccaacagattctactggtccaggttgggtttagacaaagagcaagga
atgattcatctggagatcagcgtctccgatggacggtcacagtacatcacttgtaaactt
cagaattgctctgatggaaacaagggcaagcctttccctggatttatcatccctaattcc
ctggtggttcaggatgaatacgttttcatccaggtgccagtaggtggtcagtctgtccat
tatgtttcctataaaagaaatgctttttacccaatgaagcttcccaagtacactctgcca
aaggacctgcagataattagcaccgatgacaaccaggtggtggcagcgattcaggaccgg
caccagaacgactcgtacaacctgtacatgtctgagtccagagggttgttcttcacactg
atgctggagaacgctgtgagcagcggaggaccagagggaaacatcatgatagacctctat
gaggttgcagggattaaaggggtgttcctgtcaaataaagttgttgagaaccaagtgaaa
acttatatcacctacaacaaggggagagactggcgtctccttcacgctccaacaaccgat
ctccagggaaacaaggtctattgtgaacaaccttactgttcgttgcatctgcaccttcac
gtgtcagagaatccttacacctcgggaaacattgtcagcaaagactcagccccaggaatc
atcatagcgtcaggcgtggttggacctgagctgaccagtaataacgtcagtattttcatc
acgtccgatgctggaaacacctggagagaggtttttcaggaagagtacagcgtgtttttc
ctgaatcaaggaggatctctggtggccatccgacacacacctctgccaattagacacatt
tggctgagttttgatgagggcagaaactgggacaaatacagcttcacctcctctccgctg
tatgtggacggggtgctgggcgagcccggagaggacaccctcataatgacgatattcggc
catttcagtcatcgatctgagtggcaactcatcaaaactgacttcaggtccatttttcaa
caacgatgcacatctgaagattacatgacatggcagttacacaacgagggcgaagtgtgc
atcatgggaatgaagagaatcttccaaaaaccaaaagcaaacgttcgatgtgtcaacgcc
agaaatcagtatatttcccagatgtcaaattcctgcccgtgtacagaggcggattttgag
tgcgactacggattcgagaggcaggttgaccgcagctgcgctccgtctttctggttcgtt
cctacggcaacatccagagactgcatccgcggggacagcttcctcaacaccaccggatat
cgccgggctttctctaacaactgcacggatggcgcactgttgaagtacagccccacgcgt
caaaagtgtcccagtcaggcccccaggggcctccagctcttcaccagcgaggggacactg
gtggcaaccctggataggaatgtcactttcttggtctttctggaggagggtcttggctcc
atgacgagcattacagtggactttggtgacggcacagcgatatcgtacgttaacataagc
tccatcgacgacggcgtcaagcacatctacagcagagtcggcatttaccaagtttccgcc
acagccaccaacacgctgggcttcgatagggtgatcctctacctgcacgtctcctgtcaa
cttgagcaggtccaactctcggccccgtcagtggttgtaaagaacaaagcagtaaacctc
actacagtgttgcggcccaacaacgtgggaacagtcagctattactggtggtttgataac
aaaacggagcctgttgtgactctggacggaacaatgtccttcaccttctccaaggaggga
cgtcacaccgtcactgttcaggcttcggttggcaataccgtccatcaggaccaaatgact
gtgactgtttatgattattttcggtcgtacgttttgggcttttcttctaatttggacgag
cagaaccccggtatgtctgagtggagagaggacatcagcagagtggtgaagagcaacatg
gttcaggtcacgggaataaatgacgagcaactcctggtcacggtgatcccaggtttaccg
acaacggcggagattttcattgttcccgaaaagaaggcgagaggcggggggatggatgag
aagtgggcgcacctggatcagctttctcaggttctgctaagtgctttgaaccaggacctc
atccagttcacactcaagcccggggtgcaggtgaacgtgtacgccacgcagctgtctccg
gctcctcttgtggacagcagcgacagtggccacagcgcaactgcagtcatcatgcttgtg
tcagtcgtgctgatgggcttggctgtcttcgtaatatacaaatttaaaaggaagatcccg
ggcatcaacacatacacagcagagcagcctgacaaagaacaagaggtcatcccgacagtg
acctccatagacatcccaaatcctgagggggagaagctgacctcgctggatcacgtggac
gtacagttggactcaagggccagaggctacctgccatctcacacagacatcaagctctct
gatgaagcgccccatgtgttttaa
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