Gasterosteus aculeatus (three-spined stickleback): 120820794
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Entry
120820794 CDS
T07457
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120820794 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120820794 (srfa)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
120820794 (srfa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
120820794
NCBI-ProteinID:
XP_040034881
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All DBs
Position
VI:2817556..2833540
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AA seq
602 aa
AA seq
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MLPSRLGSAPSGNGSSSGRGNTGHGLAIVGSGIRPVLVRAGQALPGVCESDGRQGERDAI
GMLGANGPGCSRGVRPGNGIGMTPLQTAVQSNMVPAGVGLAHGARFDPDRESAPLCSGSD
NDSDSAEDDDPVGSLGDSRRGVKRERGEMEAAGPGQEVGIPPGGYGMVPGGVAGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMGDT
KDTLKPTFTVASLPGSTSSAQCTVPTTSTTMQVSSGSSFPITNYLAPVSASGNISANGTV
LKTAAGSAGVMQLPSGFTFMPAGTTLPPGTPTIPLSQLQHSLALQGQHGQALAAQQPPQG
QQAVFRFPAAVSLAGPGVPQQLQAIQVHHNAQSGSNSDGSLDISHTSTNSTATVSLPATI
VTSSMPTSVAGHMMYPSQHTVMYASTPTLTDGGLAVLNAFSQGTSAMQVSHAQGQDSERS
LFPTLGGVPQVFLTAPQGTVQIPVSAVQLHPMVIGPQSGGSSSNLTELQVVNLDAAQNSK
SE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccggcttggatcggcaccatctggaaacgggtcctcttcgggcagaggt
aacacgggacacgggttggcgattgtcggcagcgggatccgtcccgttttagtcagagca
gggcaagctttacctggggtctgcgagagtgacgggcgacagggggagagagacgccatc
gggatgctgggggctaacggtccagggtgttcgagaggtgtgagaccggggaacggcatt
gggatgacccctctacagaccgccgtccagagcaacatggtgcccgcgggagttgggttg
gcgcacggagccaggttcgacccggacagggaaagcgcgcctctgtgcagcggctcggac
aatgactctgactccgcagaggatgacgatccggtgggttcactgggggacagccggaga
ggggtgaaacgagagaggggggagatggaagcagcggggccgggacaagaggtgggaata
cctcccggaggttacggcatggtcccggggggcgtcgcgggggcaaagccggggaagaaa
acacgtgggcgcgtcaagataaagatggaatttattgacaacaagttgagacgttacacc
actttcagcaagaggaagactggtattatgaaaaaggcatatgaactctccaccctgacg
gggacccaggtcctgctacttgtggccagtgagacgggtcatgtctacacgtttgccacg
cgcaaactccaacccatgatcacgagtgaaacgggcaaagctctgatccagacgtgcctt
aactcgccggactcaccgccacgctccgacccctccacggaccagcgcatgagcgccacg
ggcttcgaggagacggacctcacctatcaggtgtctgagtcggagagcatgggcgacaca
aaggataccctgaagcccaccttcacggtagccagcctaccgggcagtactagcagcgcc
cagtgcaccgtgcccaccacctccaccaccatgcaggtgagcagcggctcttcgtttccc
atcaccaactacctggcccccgtctcggcgagcggcaacatcagcgccaacggcacagtc
ctcaaaaccgccgcaggctctgcaggggtcatgcagctgcccagcggcttcacgttcatg
cctgcaggcactactctaccccctggcactcccaccattcctctgagccagctgcagcac
tccctggccctccaggggcagcatggtcaggcccttgctgcccagcagcctccgcaggga
cagcaggctgtcttccgcttccctgctgctgtctccctcgcaggaccaggggttccccag
cagctccaggcgatccaggtacaccacaacgcccagtccggctccaacagtgacggcagc
ctggacatctcccacacctccacaaactccaccgcaacggtgagtctcccggcaaccatt
gtcacctcatcaatgccaacgtctgttgcgggtcacatgatgtaccccagccagcacaca
gtaatgtacgcctccaccccgacgctgactgacggggggctggcagtgctcaacgccttc
tcccagggcacctcggccatgcaggtgtcccacgcacagggccaagactcagaacgttct
ttgtttcctaccttaggtggtgtccctcaggtgttcctcacagcacctcaaggcacggtg
cagatccctgtttcagcggtgcagcttcacccaatggtgattggcccgcagtcgggcggg
agcagcagtaacctgacggagctccaggtggtcaacttggacgcagcacagaactcaaag
agcgaatga
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