Gasterosteus aculeatus (three-spined stickleback): 120822128
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Entry
120822128 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120822128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120822128
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120822128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
120822128
NCBI-ProteinID:
XP_040037465
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Position
VII:29578469..29588172
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AA seq
1746 aa
AA seq
DB search
MAASAATGSSSPGLCPNYAVICSFLERYGALLDLPELTFPQLERSLQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKVCQEFNTTWAWELEQNGYQELTSECKTGILKYLCECQF
DENVKFKTAINDEDPEKMRLQPIGRDKDGQMYWFQLDQEDNVRVYLEEQDDLDGSSWKCI
VKDRNDLAEVVALLKTQIDPELLKRDQENKPEGEVKKLEDTSDDDSKDSTKAARPVSPKM
ENDEKETEKDDLKTEASDTKLSLNGVAEGSGPAEVHAEKSSGDLDVSTKSRSIKEEPMEA
CGGNASEPAAEAPRVPVKAEKAGEAKKSSAEEVQQALKDDQQAKIPLKKRGMKYSEDFEK
SSGIIVQNPLVPPLREAPTADPAPTADPAPTADPAPTTDPTSTADPPPQRPRPHNRPLLH
NRPRPLSRPLLHNRPLLHSRPRPHNGPHIHSRPLLQNRPRPHNGPLPHSRPLPHNRHHLH
SRPSSKTDPAPTADPAPEQTSAPPVLTVNGEVLPGPEKVLRGRPALKELATEAGESAERL
RRDGALPDQGEGQGEGQDCSEEALVPNREDSGEKHPNVPEGNAPKGKTECPTETRDVDNA
PETPSDRDEREKVEDTTKESCETKTGESGRRKEVESEGSELKEASPTRGTTACETDLQKS
TTPGVLQATESGDRDAPKKCPDAASVIKKTAGPATRETSGGRSTAGDAVGSSVIKQFAAS
CKPAQRPDAETKTEGDAGAASGDTETSKNSEEGKKTGGRDNGTIRDDSKKSDTTLTAGDV
KAVGHHPKAREEDKAEGDSAARKRKDASGGKDKPSSSVEDKTTSQGAERCHMGQRVDKTE
AERPSASKKDTDKEKRDTDEMKKDTEKNVDKETKKDTDAKTDNERKVTDVEKKKDTDKET
KKDTNIENKKDTEKKKDTNIEKQKDTDKKRDTVTDKEKDTNIEKKKDTDQKKDTNIEKKK
DTDTEKENDTDKEKDTNIEKTKDTKVESKEQEGARSGTEASTKPQESAPQTAGKELDPLE
KDVGPDREPGEDGGPKSESRDEASAKKELANGGRPTSRTFNPRGHRRKAQLQRDEIRADS
ESVPAAGRCLRRSVRISRPTAKAVEVHDRKAEKPAAEKDGDDEAEKEKLLLLEEEEEEEG
KAVQKNPREKKVDQEDRPKPKGRKRRRVRWSNTRSRRKKKGSEDDNSDEESSEDEDEEES
EDDSDEDYKVERSRKRRSRNRERRSSASSTSSDDDLPPNDDPCKHCGLPNQPELILLCDS
CDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLDEQLTNLDAALKKKERAERRKERL
IYVGISLENIIAPSGEVEEEKPEIIVKEKKEAKRSKSWGRRSTRTKKSISYRFDEFDEAI
EEAIEEDIKEAEGGGAGRGKDMANITGHRGKDMSTILEAGEGKENGRPPRPPAGQRRKKR
RRLNDLDSDSTVEEEESEEEFRVSESSEEEFVVTENESEGESESNNSGSNGDGKRRNASS
RRRKPLKRRRSSRKRRRPRGYSDDEEEETDEEDEEEIVTEGSSEFSDSDLDVSFRRSRRS
QKKRVNYCETSESGGSQNETRPSKTKRRVRPDSSDSDASSSRGSEEEPRGRGAKRRADSE
EDESQQRRRRLALKRRRASEDDESDDDSDESSEEDRPIRKRVNRIDSDDSEDEDDDEEGK
DQKEEAKEKKAAGTPDEESTGTTPVDCKAAAALPPTNGQSSLKGPVRQARRGAGPPKNIA
PHQLLP
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggggagttcttccccaggtttgtgtccaaattacgccgtg
atttgctccttcctggaaaggtacggagcgttgttggacttgccggagctcaccttcccc
cagctggagcgatccctgcaggacacatcctccgtcccgaagctgctggtcgatctccac
gtgaagctgctgaggaagatcggcaagtctgtgtcagcagaccgatgggagaagtactta
gtgaaggtatgtcaggagttcaacaccacgtgggcgtgggagctcgagcagaacgggtac
caggagctgacgagcgagtgcaagacggggatccttaagtatttgtgcgagtgtcagttt
gacgaaaatgtcaagttcaaaacggccatcaacgacgaggacccggagaagatgcggctg
cagcccatcggccgggacaaagacggtcagatgtactggttccagctggaccaggaggac
aacgtgcgcgtctacctggaggagcaggacgacctggacgggtcctcgtggaaatgcatc
gtcaaagatagaaacgacctggccgaggtagtggctctgctgaagacgcaaattgacccc
gagctgttaaaaagagaccaagaaaacaaacccgagggtgaagttaaaaagctcgaggac
acgtccgacgacgacagcaaagactccaccaaggccgcccgtcccgtctccccaaagatg
gagaacgatgagaaagagacggagaaagacgacttgaaaacggaagcctccgacaccaaa
ttgtctctgaacggcgttgctgaaggcagcggtccagcagaggtccatgcggaaaagtcc
tcaggagatctcgatgtcagcaccaagagccggagcatcaaagaggagccgatggaggcg
tgtggcggtaacgccagcgaacctgccgccgaggcgccgcgcgtccccgtgaaggcggag
aaggccggcgaggcgaaaaagagcagcgcggaggaggttcagcaagcgctgaaggacgac
cagcaggccaagatccccctgaagaagagggggatgaagtacagcgaagacttcgaaaag
agcagcggcatcatcgtgcaaaacccgctggtccctccgctcagagaagcccccacagca
gaccccgcccccacagcagaccccgcccccacagcagaccccgcccccacaacagacccc
acctccacagcagaccctcctccacaacgaccccgcccccacaacagacccctcctccac
aacagaccccgccccctcagcagacccctcctccacaacagacccctcctccacagcaga
ccccgcccccacaacggaccccacatccacagcagacccctcctccaaaatagaccccgc
ccccacaatggacccctcccccacagtagacccctcccccacaacagacaccacctccac
agcagaccctcctccaaaacagaccccgcccccaccgcggaccccgcccccgagcagacc
agtgcgccgccggttctgactgtgaacggggaagttctgcctggaccagagaaagtcctc
cggggacgcccggcgctgaaggagctcgccactgaagccggtgaatctgccgagcggcta
cggagggacggcgccctgccggaccagggggaggggcagggggaggggcaagattgcagc
gaggaggcgctcgtacccaacagagaagactcgggcgagaagcacccgaatgtgccagaa
ggcaacgcgccaaaaggaaagaccgagtgtcctacagagaccagagacgtagacaatgca
ccagagacgccgtctgatcgggacgagcgagaaaaagtagaggacaccacaaaagagtct
tgtgagacgaaaaccggagagtcgggaagacgcaaagaagtcgagtcggagggttccgag
ttaaaggaggcgtctccgacgagaggaacgacggcgtgcgagaccgacttgcagaaatcc
acgacgccgggagtcctccaagcaactgagagcggagacagagacgctccaaagaaatgt
cctgacgcagcgtctgtcattaaaaagacggcgggaccagcaaccagagagacgtcggga
ggacggtccaccgctggagacgccgtcgggtcctctgtcattaaacagttcgccgcatcg
tgtaaacctgcacagcggcccgatgcagagacaaagacggagggggacgccggcgcagcc
tctggagacacggagacgagtaaaaactccgaagaggggaagaagacgggcggccgagac
aacggtacgatacgcgacgactccaagaagagcgacaccacgcttaccgccggggacgtg
aaagcagtaggacaccatccaaaggctcgagaagaggacaaagctgagggggactccgct
gcacgaaagaggaaggacgcttctggggggaaagataagccatccagctctgtggaggac
aaaaccacctctcaaggagctgaacgatgccacatgggacagcgagtggacaaaaccgag
gcagagcgtccatcggcgagtaaaaaggacacagacaaggaaaagagggacacagacgag
atgaaaaaggatacagagaagaacgtagacaaggaaacaaaaaaagacaccgacgccaag
acggacaatgaaaggaaggtcacagacgttgaaaagaaaaaggacacagataaggaaact
aaaaaggacacaaacattgaaaataaaaaggacactgagaagaaaaaggacacaaatatt
gaaaagcaaaaggacactgacaaaaaaagggacacagtcactgacaaggaaaaggacaca
aatattgaaaagaaaaaggacactgaccagaaaaaggacacaaacattgaaaagaaaaag
gacactgacaccgagaaggaaaatgacactgacaaagaaaaggacacaaatattgagaag
acaaaggacacaaaggtagaaagcaaagagcaggaaggagctcgtagtggaactgaagcc
tcgaccaaaccgcaggaatctgctccccaaaccgccggcaaagaactggacccacttgag
aaagacgtcggcccggacagagaacccggcgaggacggcggccctaaaagcgagagccga
gacgaggcgtcggcaaagaaagagttggccaacggcgggaggccgacatcccgcacgttc
aatcccagaggccaccggaggaaagcccagctccagagggacgagatccgagcggactcc
gagtccgtccccgccgcggggaggtgtctccgaaggtccgtgaggatctccaggcccacg
gccaaggcggtggaggtccacgacaggaaggcggagaaacccgcggccgagaaggacgga
gacgacgaggccgagaaagagaagttgttgttgttggaggaggaggaagaggaggaaggg
aaagctgtacagaagaatcccagagagaagaaggtggaccaggaggatcggcccaaacca
aaggggaggaagaggcggagggtccggtggtccaacacgcggtcccgccgcaaaaagaaa
ggctccgaagacgacaacagcgacgaggagtccagcgaggacgaggacgaggaggagagc
gaggacgacagcgacgaagactacaaggtggagcggagcaggaagaggcggagccgcaac
cgagagagacgaagctccgcctcctccacgtcctctgacgacgacctgccccccaacgac
gacccctgcaaacactgcggcctcccgaatcagcccgagctgatcctgctgtgtgactcg
tgtgacagcgggtaccacaccgcctgcctgcggcctccgctcatgatcatccccgacgga
gagtggttctgtccgccctgtcaacacaagctgctctgcgacaagttggacgagcagctc
acgaacctggacgccgctttgaagaagaaggagcgcgccgagagacggaaagagcgactc
atctacgttggaatcagtcttgaaaacatcatcgcgccctcgggggaggtggaggaggag
aagcccgagatcatcgtcaaggagaagaaagaagcgaagcggagtaagagctggggtcga
aggtcaacgaggaccaagaaatccatcagctacagatttgatgaattcgacgaggcgatc
gaggaggcgatcgaggaagacatcaaagaagctgagggcggaggagctggacggggcaaa
gacatggccaacatcaccggacaccgagggaaggacatgtccaccatcctggaggcgggc
gagggcaaagagaacgggcgcccgccccgcccccccgccgggcagcgcaggaagaagcgc
cggcgcctcaacgacctggacagcgacagcacggtggaggaggaggagagcgaggaggag
ttccgcgtcagtgaaagctcggaggaggagttcgtcgtgacggaaaacgagagcgaaggc
gagtcggagtccaacaacagcggcagcaacggggacggcaagcggcgaaacgcctcctcg
cggcgcaggaagccgctgaaacggcggcggagctccagaaagcgacgacggccgaggggc
tactcggatgatgaagaggaggaaacggacgaggaagatgaggaggaaatagtgaccgaa
ggctccagcgagttcagcgacagcgacctggacgtgagcttccggcgctcgcgccgcagt
cagaagaagcgagtcaactactgcgaaacgtccgagtccggcggctctcagaacgaaacc
cgaccgtccaagacgaagcgccgggtccgtccggacagctccgacagcgacgcgagttcc
tccagaggctccgaggaggagcccaggggccgcggggcgaagaggagagccgactccgag
gaggacgaatcccagcagcggcgcagacgcctcgctctcaaacgccggagagcctccgag
gacgacgagtcggacgacgactcggacgaatcgtctgaggaggaccgtccgatccgaaaa
cgcgtgaaccgcatcgactccgacgacagcgaggacgaggatgatgatgaggaggggaag
gaccagaaggaggaagcgaaggagaagaaagccgctggaaccccggacgaggagtcgaca
ggaacgaccccggtggactgcaaagcggcggcggcgctgccgcccaccaacggacagagc
tcattaaagggccccgtcaggcaagcccgccgcggcgcaggaccccccaaaaacatagcg
ccacaccaactgttgccatag
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integrated database retrieval system
