Gasterosteus aculeatus (three-spined stickleback): 120824104
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Entry
120824104 CDS
T07457
Symbol
prdm5
Name
(RefSeq) PR domain zinc finger protein 5
KO
K22534
PR domain zinc finger protein 5 [EC:2.1.1.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120824104 (prdm5)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120824104 (prdm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2H2_jaz
SET
zf-C2H2_8
zf-C2H2_3rep
zf-C2H2_11
zf-H2C2_2
Zap1_zf1
zf-C2HC_2
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
120824104
NCBI-ProteinID:
XP_040040624
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Position
VIII:19301040..19309386
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AA seq
356 aa
AA seq
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MTMLGMYVPDRFSLKASQVQDGIGLYTARRVKKGEKFGPFAGEKRLPAELEESSDTRLMW
EVRGTKGDVLYILDASNPRHANWLRFVHQAPSQEHKNLAAIQDGENIFYLAVDDIETDTE
LLIGYLDSDMEEEEEEEEEKVIRDEDENSKEAKHLVEMELVIKKEDHPCLLCESSFPSEE
ILAAHLQSLHQRPSTEEKDFKCKTCGKKFPVKQALQRHVLHCTESLDPSGDSKAHQCSIC
HNTFGSISSFEQHKEACRGDARFICKAESCGKRFKSKDALKKHKGNVHTGSARRKLTCTI
CNRKCSSSLNLQEHRKVSLASTRRPDASCCNAFWVPSPRPTRSGQTREPDEEASVE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttgggtatgtacgtgccggaccgcttctccctgaaggcgtcacaggtccag
gatggaatcggtctctacacggcgaggcgcgtgaaaaagggagagaagttcggcccgttc
gcgggggagaagaggcttcctgcggagctggaggagagctcggacacccggctcatgtgg
gaggtccgcggcaccaaaggagatgttctgtatattctggacgccagtaacccgcggcac
gccaactggctgcggtttgtccaccaggcgccttcacaggagcacaagaacctggcggcc
atacaggacggagagaacatcttctacctggccgtggacgacatcgagacggacacggag
ctcctgataggctacctggacagcgatatggaggaagaggaggaggaggaagaggagaag
gtcatccgagatgaagacgaaaacagcaaagaagctaagcatcttgtggaaatggaactg
gtcataaagaaggaggaccacccctgcttgctgtgcgagagcagcttccccagcgaggag
atcctggctgcccacctccagagtctgcaccagaggcccagcacggaggagaaggacttc
aaatgcaagacctgcggcaagaagttccccgtgaagcaggctctgcagcgccatgttctg
cattgtactgaatctctggacccatccggcgactctaaagcccaccagtgctccatctgc
cacaacaccttcggctccatatccagctttgaacagcacaaggaagcctgcagaggagac
gcccgcttcatctgcaaagcagagagctgcggcaaaagattcaagagcaaagacgctctg
aagaagcacaaaggaaacgttcacacggggagcgcgcggcggaaactcacgtgcaccata
tgcaacaggaaatgttcctcctcgctgaacctgcaggagcaccgcaaggtgagcctcgcg
tcgacgcggcggcccgacgccagttgttgcaatgcattctgggtgccttcacctcgtccc
acgaggtcagggcaaactcgagagccagatgaggaggcgtcagtggagtga
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